Basic Information | |
---|---|
Species | Aquilegia coerulea |
Cazyme ID | Aquca_034_00209.1 |
Family | PL1 |
Protein Properties | Length: 450 Molecular Weight: 49393.8 Isoelectric Point: 7.6151 |
Chromosome | Chromosome/Scaffold: 34 Start: 1466205 End: 1471845 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
PL1 | 162 | 367 | 0 |
VIQNEPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACITVQFVTNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWV DHNSLSNCADGLVDAVMGSTAITVSNNHFAHHNEVMLLGHSDSYTKDKGMQVTIAYNHFGAGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINS QGNRYL |
Full Sequence |
---|
Protein Sequence Length: 450 Download |
MAVVVSVRGV SGFVVVMLLL FIGVVATVQK EKVFGSSVEK TEELQSLKNS TMAERYEEVE 60 DGGRNEHAVD DPEEIASMVE MTIRNNTERR KLGFLSCGTG NPIDDCWRCD RNWHRNRKRL 120 ADCGIGFGRN AIGGRDGRFY VVTDPGDDDP VNPRPGTLRH AVIQNEPLWI VFKRDMVITL 180 KQELIMNSFK TIDGRGVNVH IANGACITVQ FVTNVIIHGL HIHDCKPTGN AMVRSSPSHY 240 GWRTMADGDA ISIFGSSHIW VDHNSLSNCA DGLVDAVMGS TAITVSNNHF AHHNEVMLLG 300 HSDSYTKDKG MQVTIAYNHF GAGLIQRMPR CRHGYFHVVN NDYTHWEMYA IGGSASPTIN 360 SQGNRYLAPV NPFAKEVTKR VDTDARQWKG WNWRSEGDML LNGAYFTSSG ALSSASYSMA 420 SSLGAKSSSM VASITSGAGV LSCRRGNQC* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3866 | PelB | 3.0e-28 | 188 | 364 | 189 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
pfam00544 | Pec_lyase_C | 7.0e-72 | 181 | 366 | 209 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 2.0e-81 | 175 | 369 | 206 | + Amb_all domain. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ADD62392.1 | 0 | 41 | 449 | 38 | 445 | pectase lyase [Prunus persica] |
DDBJ | BAF43573.1 | 0 | 19 | 449 | 1 | 425 | pectate lyase [Prunus persica] |
EMBL | CBI33346.1 | 0 | 41 | 449 | 31 | 430 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002285639.1 | 0 | 41 | 449 | 33 | 432 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002297822.1 | 0 | 3 | 449 | 1 | 450 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1pxz_B | 0 | 101 | 442 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 0 | 101 | 442 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 3zsc_A | 9e-18 | 170 | 367 | 50 | 247 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1vbl_A | 0.00000000000003 | 191 | 366 | 135 | 330 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1pe9_B | 0.0000000000002 | 191 | 439 | 90 | 357 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |