Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_036_00154.2 |
Family | GH5 |
Protein Properties | Length: 400 Molecular Weight: 45607.1 Isoelectric Point: 7.1632 |
Chromosome | Chromosome/Scaffold: 36 Start: 2254767 End: 2260119 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 51 | 348 | 6.8e-30 |
NGEAFYVNGWNSYWLMDQAVDEYSRPRVRAMLQAGAKMGLSVCRTWAFNDGGYNALQLSPGRFDEHTFKGLDRVIAEARKHGIRLMLSLVNNLQPFGGKT QYVKWAWEEGVARSSSNDSFFFDPTIRHYFKNYIKTILTRKNHITGIEYRNDPVIFAWELMNEPRCMTDPSGDALQDWIEEMAGFVKSIDKNHLLTVGLE GFYGPKSPAKLNVNPGEWAGELELEDTLNYTKKWVTSHIEDGDKILKKPVLFAEIGLSYNNKDFEPSQREVFYKAIYDIIYKSAKRHRAGAGAFIWQF |
Full Sequence |
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Protein Sequence Length: 400 Download |
MLLSNGMLYP VLGFASCIAF IYMSMVDLRP QYLKGPEISF VGRNGTQFIL NGEAFYVNGW 60 NSYWLMDQAV DEYSRPRVRA MLQAGAKMGL SVCRTWAFND GGYNALQLSP GRFDEHTFKG 120 LDRVIAEARK HGIRLMLSLV NNLQPFGGKT QYVKWAWEEG VARSSSNDSF FFDPTIRHYF 180 KNYIKTILTR KNHITGIEYR NDPVIFAWEL MNEPRCMTDP SGDALQDWIE EMAGFVKSID 240 KNHLLTVGLE GFYGPKSPAK LNVNPGEWAG ELELEDTLNY TKKWVTSHIE DGDKILKKPV 300 LFAEIGLSYN NKDFEPSQRE VFYKAIYDII YKSAKRHRAG AGAFIWQFMV GGMQEYNDDF 360 GIVPWERPST FRLITEQSCR LAAVQQGQGQ LNKMANELC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12876 | Cellulase-like | 0.007 | 198 | 249 | 61 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
cd00551 | AmyAc_family | 0.006 | 98 | 207 | 132 | + Alpha amylase catalytic domain family. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; and C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost this catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. | ||
pfam00150 | Cellulase | 0.002 | 175 | 318 | 162 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 1.0e-26 | 48 | 380 | 339 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95966.1 | 0 | 1 | 399 | 4 | 431 | unknown [Populus trichocarpa] |
EMBL | CBI21857.1 | 0 | 1 | 399 | 1 | 428 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273772.1 | 0 | 1 | 399 | 6 | 433 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002330687.1 | 0 | 1 | 399 | 4 | 431 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517909.1 | 0 | 1 | 399 | 1 | 427 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 39 | 384 | 5 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 2.00386e-43 | 49 | 386 | 21 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 2.00386e-43 | 49 | 386 | 21 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 2.00386e-43 | 49 | 386 | 21 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 2.00386e-43 | 49 | 386 | 21 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |