Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_038_00141.1 |
Family | PL1 |
Protein Properties | Length: 366 Molecular Weight: 39643.5 Isoelectric Point: 6.5039 |
Chromosome | Chromosome/Scaffold: 38 Start: 1602286 End: 1605614 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
PL1 | 3 | 193 | 0 |
IKLNEELIVNSFKTIDGRGVNVHIVGGGCITLQFVSNIIIHNIHIHHCVPSGNANVRSSPTHYGFRTRSDGDGISIYSGRKIWIDHCSLSYCKDGLIDAI MGSTGITISNSYFSHHNEVMLLGHNDNYLPDSGMQVTIAFNHFGEELVQRMPRCRHGYFHIVNNDFTHWEMYAIGGSANPTINSQGNRYTA |
Full Sequence |
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Protein Sequence Length: 366 Download |
MLIKLNEELI VNSFKTIDGR GVNVHIVGGG CITLQFVSNI IIHNIHIHHC VPSGNANVRS 60 SPTHYGFRTR SDGDGISIYS GRKIWIDHCS LSYCKDGLID AIMGSTGITI SNSYFSHHNE 120 VMLLGHNDNY LPDSGMQVTI AFNHFGEELV QRMPRCRHGY FHIVNNDFTH WEMYAIGGSA 180 NPTINSQGNR YTAPVDPNAK EVTKRVLTDE KEWNDWNWRT DGDMMVNGAF FVPSGFGLGQ 240 QYAKASSVEP KSAGIIDQLT MNAGVMGGSG NRDNSRSISY PGFNNGGTST VPGVAVGPGE 300 GGGGGQGEGG DGNDVNYFGM IFGSNSSPRQ PPPPSPIFLS FLIIISSLFF ILYTNQIGLT 360 LLLFL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3866 | PelB | 6.0e-21 | 8 | 189 | 194 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
pfam00544 | Pec_lyase_C | 4.0e-55 | 7 | 191 | 207 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 2.0e-63 | 1 | 194 | 205 | + Amb_all domain. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK54283.1 | 0 | 1 | 268 | 149 | 417 | AC034258_1 putative pectate lyase [Oryza sativa Japonica Group] |
GenBank | AAP54096.1 | 0 | 1 | 268 | 149 | 417 | pectate lyase 12 precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] |
DDBJ | BAF26675.2 | 0 | 1 | 268 | 149 | 417 | Os10g0457200 [Oryza sativa Japonica Group] |
GenBank | EEC67092.1 | 0 | 1 | 287 | 149 | 434 | hypothetical protein OsI_33884 [Oryza sativa Indica Group] |
RefSeq | XP_002268818.1 | 0 | 1 | 332 | 147 | 465 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1pxz_B | 0 | 1 | 266 | 76 | 345 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 0 | 1 | 266 | 76 | 345 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 3zsc_A | 0.00000000000001 | 1 | 191 | 56 | 246 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1jta_A | 0.00000000000005 | 4 | 264 | 78 | 357 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1jrg_B | 0.00000000000005 | 4 | 264 | 78 | 357 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |