y
Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_053_00137.1 |
Family | GH14 |
Protein Properties | Length: 549 Molecular Weight: 61411.3 Isoelectric Point: 7.4548 |
Chromosome | Chromosome/Scaffold: 53 Start: 1605971 End: 1609194 |
Description | chloroplast beta-amylase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 90 | 504 | 0 |
YIMLPLDTVTIAGNLHRPKALNASLMALKSAGVEGVMVDAWWGLVEKNGPMKYNWSGYVDLVQMVEKHGLKIQVVMSFHQCGGNVGDSCSIPLPPWVLEE ISKNPDLVYTDKSGRRNPEYISLGCDSLPVLAGRTPIQVYSDYMRSFRDQFQDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWKFPGIGEFQCYDKYMK ASLKASAIAIGKKDWGTNGPHDSGQYNQFPEDTGFFRRDGTWNTEYGQFFLHWYSGKLIEHGDQILAAAQGIYRGSGAKLSGKVAGIHWHYNTRSHAAEL TAGYYNTRHHDGYVPIAQMLGKRDVVLNFTCMEMRDEEQPESANCSPQGLVKQVKMATKFTGTDLAGENALERYDQGAYAQVLETSRSDSGNGLTAFTYL RLNKRMFEEDNWRNL |
Full Sequence |
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Protein Sequence Length: 549 Download |
MALTIRYSSS LINPKDTKNT KTSDDFSSSV SFPQLKTSHR LQMKNSLMNE AQTSHENISF 60 FDGRGEEKST QRHHALSGGH QKDGSKVPVY IMLPLDTVTI AGNLHRPKAL NASLMALKSA 120 GVEGVMVDAW WGLVEKNGPM KYNWSGYVDL VQMVEKHGLK IQVVMSFHQC GGNVGDSCSI 180 PLPPWVLEEI SKNPDLVYTD KSGRRNPEYI SLGCDSLPVL AGRTPIQVYS DYMRSFRDQF 240 QDYLGRVIVE IQVGMGPCGE LRYPSYPESN GTWKFPGIGE FQCYDKYMKA SLKASAIAIG 300 KKDWGTNGPH DSGQYNQFPE DTGFFRRDGT WNTEYGQFFL HWYSGKLIEH GDQILAAAQG 360 IYRGSGAKLS GKVAGIHWHY NTRSHAAELT AGYYNTRHHD GYVPIAQMLG KRDVVLNFTC 420 MEMRDEEQPE SANCSPQGLV KQVKMATKFT GTDLAGENAL ERYDQGAYAQ VLETSRSDSG 480 NGLTAFTYLR LNKRMFEEDN WRNLVVFVNN MSQGGRMVRL SEYDSTGSDL YVGFIHDKNM 540 EIKKAVLV* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02161 | PLN02161 | 1.0e-144 | 62 | 512 | 462 | + beta-amylase | ||
pfam01373 | Glyco_hydro_14 | 8.0e-170 | 90 | 507 | 431 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
PLN02803 | PLN02803 | 0 | 1 | 546 | 547 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 62 | 514 | 459 | + beta-amylase; Provisional | ||
PLN02801 | PLN02801 | 0 | 87 | 511 | 433 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62440.1 | 0 | 1 | 538 | 1 | 531 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282871.1 | 0 | 1 | 538 | 1 | 531 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326690.1 | 0 | 1 | 548 | 1 | 547 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329547.1 | 0 | 1 | 548 | 1 | 547 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517513.1 | 0 | 1 | 548 | 1 | 546 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdp_A | 0 | 87 | 511 | 12 | 441 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1q6c_A | 0 | 87 | 511 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 87 | 511 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1ukp_D | 0 | 87 | 511 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_C | 0 | 87 | 511 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794833 | 411 | 125 | 535 | 0 |
BU103692 | 539 | 1 | 535 | 0 |
HO781538 | 406 | 30 | 434 | 0 |
HO825836 | 375 | 161 | 535 | 0 |
DT744552 | 275 | 1 | 275 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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