Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_072_00077.2 |
Family | GT41 |
Protein Properties | Length: 749 Molecular Weight: 83815.9 Isoelectric Point: 6.0575 |
Chromosome | Chromosome/Scaffold: 72 Start: 508444 End: 521777 |
Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT41 | 363 | 742 | 0 |
IKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIVANPSYAEAYNNLGVLYRDAGNISLAIEAYEQCLKIDPDSRNAGQNRLLAMNYINEDIDDKLFEAHR DWGRRFMRLFSQYTSWDNPKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYGKYKVVVYSGVVKGDAKTNRFRDKVVKKGGLWRDIYGIDEKKVASMV REDKVDILVELTGHTANNKLGMMACRPAPVQATWIGYPNTTGLPTIDYRITDSLADPPDTRQKHVEELVRLPKCFLCYTPSSEAGPVCPTPALSNGFVTF GSFNNLAKITPKVLQVWARILCSVPNSRLVVKCKPFCCDSVRQRFLSTLEQLGLESVRVDLLPLILLNHDHMQAYSLMDI |
Full Sequence |
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Protein Sequence Length: 749 Download |
MAWTETNGVN GKDKDGHGEN GFLKLLPTSS ETSSSPAYVS PLRNKFEGKD ALSYANILRS 60 RNKFVDALAL YESIIDKDNG NVEAHIGKGI CLQMQNMGRV AFESFAEAIK LDPENACALT 120 HCGILYKDEG RLLDAAESYQ KALLADPTYK PAAECLAIVL TDLGTSLKLA GNTQEGIQKY 180 CEALKIDSHY APAYYNLGVV YSELMEYDMA LSCYEKAVMQ RPMYAEAYCN MGVIYKNRGE 240 LESAISCYER CLAVSPNFEI AKNNMAIALT DLGTKVKLEG DITQGVAYYK KALYYNWHYA 300 DAMYNLGVAY GEMLQFDMAI VFYELALHFN PHCAEACNNL GVIYKDRDNL DKAVECYQLA 360 LSIKPNFSQS LNNLGVVYTV QGKMDAAASM IEKAIVANPS YAEAYNNLGV LYRDAGNISL 420 AIEAYEQCLK IDPDSRNAGQ NRLLAMNYIN EDIDDKLFEA HRDWGRRFMR LFSQYTSWDN 480 PKDPERPLVI GYVSPDYFTH SVSYFIEAPL VYHDYGKYKV VVYSGVVKGD AKTNRFRDKV 540 VKKGGLWRDI YGIDEKKVAS MVREDKVDIL VELTGHTANN KLGMMACRPA PVQATWIGYP 600 NTTGLPTIDY RITDSLADPP DTRQKHVEEL VRLPKCFLCY TPSSEAGPVC PTPALSNGFV 660 TFGSFNNLAK ITPKVLQVWA RILCSVPNSR LVVKCKPFCC DSVRQRFLST LEQLGLESVR 720 VDLLPLILLN HDHMQAYSLM DIRRVFID* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02917 | PEP_TPR_lipo | 6.0e-18 | 51 | 422 | 408 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
TIGR02917 | PEP_TPR_lipo | 4.0e-18 | 55 | 449 | 396 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
TIGR02917 | PEP_TPR_lipo | 5.0e-21 | 52 | 434 | 411 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
TIGR02917 | PEP_TPR_lipo | 3.0e-21 | 61 | 452 | 403 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
COG3914 | Spy | 4.0e-58 | 317 | 742 | 455 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
Swiss-Prot | O82039 | 0 | 1 | 742 | 1 | 742 | SPY_PETHY RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; AltName: Full=PhSPY |
RefSeq | XP_002281883.1 | 0 | 1 | 742 | 1 | 740 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308458.1 | 0 | 1 | 742 | 1 | 742 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323412.1 | 0 | 1 | 742 | 1 | 746 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530535.1 | 0 | 1 | 742 | 1 | 743 | o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4gz6_D | 8e-39 | 222 | 638 | 6 | 386 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
PDB | 4gz6_D | 5e-17 | 113 | 269 | 6 | 155 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
PDB | 4gz6_D | 0.00000000000004 | 160 | 307 | 12 | 152 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
PDB | 4gz6_D | 0.000000003 | 190 | 341 | 8 | 152 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
PDB | 4gz6_D | 0.000002 | 55 | 198 | 16 | 152 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT769000 | 294 | 449 | 742 | 0 |
DY295408 | 313 | 430 | 742 | 0 |
GT041789 | 337 | 345 | 681 | 0 |
GT041789 | 109 | 172 | 278 | 0.000000000002 |
GT041789 | 125 | 236 | 358 | 0.000002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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