y
Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_108_00001.1 |
Family | PL1 |
Protein Properties | Length: 442 Molecular Weight: 48997.4 Isoelectric Point: 8.6624 |
Chromosome | Chromosome/Scaffold: 108 Start: 1083 End: 5937 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
PL1 | 156 | 363 | 0 |
AVIQARPLWITFRRSMVITLKQELMINSFKTIDARGVNVEIANGACLTIQFVSNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIW LDHNSLSNCADGLIDAIMGSTAITISNNFFSHHNEVMLLGHSDTYTRDRIMQVTIAYNHFGEGLVQRMPRCRHGYFHIVNNDYTRWIMYAIGGSANPTIN SQGNRYLA |
Full Sequence |
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Protein Sequence Length: 442 Download |
MAVSTRCLCL VLLFLFHFIG LIEGFEPENR LISRVEGTEQ LQSFNDTSIA EKMEEATARN 60 ENAVQDPEKI VSMVEMDIQN STQRRNLGYF SCGTGNPIDD CWRCDRNWQK HRKRLADCAI 120 GFGRNAVGGR DGRYYVVTDP SDHDAVNPRP GTLRHAVIQA RPLWITFRRS MVITLKQELM 180 INSFKTIDAR GVNVEIANGA CLTIQFVSNV IIHGLHIHDC KPTGNAMVRS SPSHYGWRTM 240 ADGDGISIFG SSHIWLDHNS LSNCADGLID AIMGSTAITI SNNFFSHHNE VMLLGHSDTY 300 TRDRIMQVTI AYNHFGEGLV QRMPRCRHGY FHIVNNDYTR WIMYAIGGSA NPTINSQGNR 360 YLAPSNRFAK EVTKRQGSRG RGWNWRSQGD LLLNGAFFTQ SGVAASASYA RASSLSAKSS 420 SMVGSITSGA GALSCRTGRQ C* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3866 | PelB | 3.0e-26 | 176 | 359 | 196 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
pfam00544 | Pec_lyase_C | 1.0e-69 | 176 | 361 | 208 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 8.0e-79 | 171 | 365 | 206 | + Amb_all domain. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN75298.1 | 0 | 36 | 441 | 34 | 445 | hypothetical protein [Vitis vinifera] |
EMBL | CBI33346.1 | 0 | 34 | 441 | 27 | 430 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265100.1 | 0 | 36 | 441 | 34 | 445 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285639.1 | 0 | 34 | 441 | 29 | 432 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002297822.1 | 0 | 1 | 441 | 1 | 450 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1pxz_B | 0 | 96 | 434 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 0 | 96 | 434 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 3zsc_A | 2e-17 | 165 | 352 | 50 | 227 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1vbl_A | 0.00000000000006 | 179 | 338 | 128 | 301 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1bn8_A | 0.000000000004 | 186 | 434 | 151 | 408 | A Chain A, Bacillus Subtilis Pectate Lyase |