| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra000058 |
| Family | AA2 |
| Protein Properties | Length: 351 Molecular Weight: 37898 Isoelectric Point: 5.1111 |
| Chromosome | Chromosome/Scaffold: 03 Start: 9103923 End: 9105792 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 45 | 315 | 0 |
| DIIGNVIVDELASDPRIAASILRLHFHDCFVNGCDASILLDNSTSFRTEKDAAPNANSARGFNVIDRMKAKLETACPKTVSCADVLTIASQISVLLSGGP WWPLPLGRRDSLQAFFDLANTALPSPFFTLAELKASFVAVGLNLSSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNSPDPSINPTYLAQLRGLCPQNGNG TVLVNFDPVTPDGFDNKYYTNLRNGRGLIQSDQELFSTPQADTIPLVEQYSSNQTAFFDAFAKAMIRMGDL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 351 Download |
| MKFSPSFSCS AMGALILGCL LLRASISNAQ LRPDFYFGTC PHVFDIIGNV IVDELASDPR 60 IAASILRLHF HDCFVNGCDA SILLDNSTSF RTEKDAAPNA NSARGFNVID RMKAKLETAC 120 PKTVSCADVL TIASQISVLL SGGPWWPLPL GRRDSLQAFF DLANTALPSP FFTLAELKAS 180 FVAVGLNLSS DLVALSGGHT FGRAQCQFVT PRLYNFNGTN SPDPSINPTY LAQLRGLCPQ 240 NGNGTVLVNF DPVTPDGFDN KYYTNLRNGR GLIQSDQELF STPQADTIPL VEQYSSNQTA 300 FFDAFAKAMI RMGDLKPLTG NQGEIRLNCS VVNSRIMSVE NEDDGVVSSI * 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00141 | peroxidase | 0.003 | 264 | 297 | 34 | + Peroxidase. | ||
| cd00314 | plant_peroxidase_like | 4.0e-32 | 45 | 313 | 298 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
| pfam00141 | peroxidase | 1.0e-50 | 49 | 200 | 152 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 1.0e-78 | 32 | 333 | 307 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 2.0e-156 | 30 | 332 | 305 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAA32842.1 | 0 | 1 | 350 | 1 | 349 | peroxidase [Arabidopsis thaliana] |
| EMBL | CAG77503.1 | 0 | 1 | 350 | 1 | 350 | peroxidase precursor [Raphanus sativus var. niger] |
| RefSeq | NP_181372.1 | 0 | 1 | 350 | 1 | 349 | peroxidase 22 (PER22) (P22) (PRXEA) / basic peroxidase E [Arabidopsis thaliana] |
| RefSeq | NP_181373.1 | 0 | 1 | 350 | 1 | 349 | peroxidase, putative [Arabidopsis thaliana] |
| Swiss-Prot | P17180 | 0 | 1 | 350 | 1 | 349 | PER3_ARMRU RecName: Full=Peroxidase C3; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1w4y_A | 0 | 30 | 334 | 1 | 306 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1w4w_A | 0 | 30 | 334 | 1 | 306 | A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate |
| PDB | 7atj_A | 0 | 30 | 334 | 1 | 306 | A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate |
| PDB | 6atj_A | 0 | 30 | 334 | 1 | 306 | A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid |
| PDB | 1h5m_A | 0 | 30 | 334 | 1 | 306 | A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
