| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra000059 |
| Family | AA2 |
| Protein Properties | Length: 349 Molecular Weight: 38026.1 Isoelectric Point: 5.7747 |
| Chromosome | Chromosome/Scaffold: 03 Start: 9107804 End: 9109815 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 49 | 314 | 0 |
| NIIVREMGSDPRITASLLRLHFHDCFVNGCDASILLDNSTSFRTEKDALPNANSARGFNVIDRMKTQIERACPRTVSCADILTIASQVSVLLSGGPSWSV PLGRRDGLQAFFVGANTLPSPFFTLDELKASFALVGLNRTSDLVALSGAHTFGRAQCQLVTPRLYNFNNTNGPDPSIDITYLAQLRALCPENRDGTVLAN FDPVTPNTFDNQYYTNLRNGRGLIQSDQELFSTPQADTIPLVEQYSSNRSVFFKAFVEAMIRMGDL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 349 Download |
| MVVSPSFSCS VVGALILGCL LLQASNSNAQ LRPDFYSRTC PGVFDIIGNI IVREMGSDPR 60 ITASLLRLHF HDCFVNGCDA SILLDNSTSF RTEKDALPNA NSARGFNVID RMKTQIERAC 120 PRTVSCADIL TIASQVSVLL SGGPSWSVPL GRRDGLQAFF VGANTLPSPF FTLDELKASF 180 ALVGLNRTSD LVALSGAHTF GRAQCQLVTP RLYNFNNTNG PDPSIDITYL AQLRALCPEN 240 RDGTVLANFD PVTPNTFDNQ YYTNLRNGRG LIQSDQELFS TPQADTIPLV EQYSSNRSVF 300 FKAFVEAMIR MGDLQPLTGN QGQIRLNCRV VNPRRSVEND DDGVVSSI* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00141 | peroxidase | 0.003 | 263 | 296 | 34 | + Peroxidase. | ||
| cd00314 | plant_peroxidase_like | 4.0e-35 | 45 | 312 | 298 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
| pfam00141 | peroxidase | 1.0e-62 | 49 | 199 | 151 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 8.0e-91 | 32 | 332 | 306 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 6.0e-166 | 30 | 331 | 302 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAA32842.1 | 0 | 1 | 348 | 1 | 349 | peroxidase [Arabidopsis thaliana] |
| EMBL | CAG77503.1 | 0 | 1 | 348 | 1 | 350 | peroxidase precursor [Raphanus sativus var. niger] |
| RefSeq | NP_181372.1 | 0 | 1 | 348 | 1 | 349 | peroxidase 22 (PER22) (P22) (PRXEA) / basic peroxidase E [Arabidopsis thaliana] |
| RefSeq | NP_181373.1 | 0 | 1 | 348 | 1 | 349 | peroxidase, putative [Arabidopsis thaliana] |
| Swiss-Prot | P17180 | 0 | 1 | 348 | 1 | 349 | PER3_ARMRU RecName: Full=Peroxidase C3; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 7atj_A | 0 | 30 | 332 | 1 | 305 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 6atj_A | 0 | 30 | 332 | 1 | 305 | A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid |
| PDB | 1h5m_A | 0 | 30 | 332 | 1 | 305 | A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid |
| PDB | 1h5l_A | 0 | 30 | 332 | 1 | 305 | A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid |
| PDB | 1h5k_A | 0 | 30 | 332 | 1 | 305 | A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
