CAZyme Information

Basic Information
SpeciesBrassica rapa
Cazyme IDBra000139
FamilyGT2
Protein PropertiesLength: 337 Molecular Weight: 37970 Isoelectric Point: 8.3354
ChromosomeChromosome/Scaffold: 03 Start: 9498887 End: 9501254
DescriptionNucleotide-diphospho-sugar transferases superfamily protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT2692636.5e-33
  SLIVPAFNEEQRLPAALEETMDYLQGRASRDKSFSYEVVIVDDGSVDGTKRVAFDFVKKYSVDNIRFIPLGKNQGKGEAIRTGMMHSRGELLLMLDADGA
  TKVTDLEKLENQIHAVAREESSIRDPALKHVDFRIGDVQVSAFGSRAHLEEKALATRKWYRNFLMKGFHLVVLLAAGSGIRDTQCGFKMFTRAAA
Full Sequence
Protein Sequence     Length: 337     Download
MESLLTVAEL GLSLLLIALW GFISVVVFEA WRRRHSNVSV ETVTTLEDPT TLKQVPCPHI    60
SDPAEKYLSL IVPAFNEEQR LPAALEETMD YLQGRASRDK SFSYEVVIVD DGSVDGTKRV    120
AFDFVKKYSV DNIRFIPLGK NQGKGEAIRT GMMHSRGELL LMLDADGATK VTDLEKLENQ    180
IHAVAREESS IRDPALKHVD FRIGDVQVSA FGSRAHLEEK ALATRKWYRN FLMKGFHLVV    240
LLAAGSGIRD TQCGFKMFTR AAARRLFTNV HLKRWCFDVE LVFLCKRFNI PMLEISVNWS    300
EIPGSKVSLL SIPNMLWELA LMSAGYRTGM WKIHHA* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00761Glyco_tranf_GTA_type1.0e-1771183113+
pfam00535Glycos_transf_22.0e-2269267199+
cd04179DPM_DPG-synthase_like4.0e-5070285216+
PTZ00260PTZ002605.0e-9560333278+
cd04188DPG_synthase1.0e-10570306237+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqNP_181493.103233532335glycosyl transferase family 2 protein [Arabidopsis thaliana]
RefSeqXP_002283615.103033330334PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002312095.103033330333predicted protein [Populus trichocarpa]
RefSeqXP_002315224.103133331333predicted protein [Populus trichocarpa]
RefSeqXP_002530857.103233332333Dolichyl-phosphate beta-glucosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3l7m_D0.00000568166493A Chain A, Structure Of The Wall Teichoic Acid Polymerase Tagf, H548a
PDB3l7m_C0.00000568166493A Chain A, Structure Of The Wall Teichoic Acid Polymerase Tagf, H548a
PDB3l7m_B0.00000568166493A Chain A, Structure Of The Wall Teichoic Acid Polymerase Tagf, H548a
PDB3l7m_A0.00000568166493A Chain A, Structure Of The Wall Teichoic Acid Polymerase Tagf, H548a
PDB3l7l_D0.00000568166493A Chain A, Structure Of The Wall Teichoic Acid Polymerase Tagf, H548a
Metabolic Pathways
Pathway NameReactionECProtein Name
dolichyl-diphosphooligosaccharide biosynthesis2.4.1.117-RXNEC-2.4.1.117dolichyl-phosphate β-glucosyltransferase
Transmembrane Domains
StartEnd
527
231248
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EX050762283243050
FY43374724612460
GR44655424212420
DV712496304203230
EX13590423512350
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_011_00165.2Aquca_011_00165.3Aquca_011_00165.4Aquca_011_00165.1
Arabidopsis lyrata482983
Arabidopsis thalianaAT2G39630.2AT2G39630.1
Brachypodium distachyonBradi1g03660.1
Brassica rapaBra005029
Carica papayaevm.model.supercontig_1.403
Capsella rubellaCarubv10023563m
Chlamydomonas reinhardtiiCre16.g652850.t1.2
Citrus clementinaCiclev10032053m
Citrus sinensisorange1.1g027065morange1.1g019818morange1.1g023346m
Cucumis sativusCucsa.010820.1Cucsa.165370.1Cucsa.165370.2Cucsa.165370.3
Eucalyptus grandisEucgr.G02933.1Eucgr.G02933.2Eucgr.G02933.3
Fragaria vescamrna26609.1-v1.0-hybrid
Glycine maxGlyma02g10150.1Glyma18g52810.2Glyma18g52810.1Glyma02g10150.3Glyma02g10150.2
Gossypium raimondiiGorai.011G260700.2Gorai.009G319400.2Gorai.009G319400.4Gorai.011G260700.3Gorai.011G260700.1
Gorai.009G319400.1Gorai.009G319400.3
Linum usitatissimumLus10005164Lus10001691Lus10023414Lus10040296
Malus domesticaMDP0000274007MDP0000272852
Manihot esculentacassava4.1_011328m
Medicago truncatulaMedtr7g026260.2Medtr7g026260.1
Mimulus guttatusmgv1a025143m
Oryza sativaLOC_Os03g60700.1LOC_Os03g60700.2
Panicum virgatumPavirv00060983mPavirv00063183m
Physcomitrella patensPp1s49_46V6.1Pp1s14_205V6.2Pp1s14_205V6.1Pp1s96_201V6.1
Phaseolus vulgarisPhvul.008G010800.1Phvul.008G010800.2
Picea abiesMA_10347707g0010MA_10428813g0010MA_159008g0490MA_158860g0090
Populus trichocarpaPotri.010G204000.4Potri.010G204000.2Potri.010G204000.1Potri.008G055700.1Potri.010G204000.3
Potri.008G055700.2
Prunus persicappa008313m
Ricinus communis30003.m000334
Setaria italicaSi036396m
Selaginella moellendorffii73379414988101926
Sorghum bicolorSb01g003140.1
Thellungiella halophilaThhalv10016901m
Vitis viniferaGSVIVT01016551001
Volvox carteriVocar20012273m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny