| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra000354 |
| Family | GH9 |
| Protein Properties | Length: 477 Molecular Weight: 51974.3 Isoelectric Point: 6.1554 |
| Chromosome | Chromosome/Scaffold: 03 Start: 10707179 End: 10709042 |
| Description | glycosyl hydrolase 9B12 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 19 | 473 | 0 |
| NYGEALTKSLLYFEAQRSGKLPSDQRVQWRGDSAPGDGSDVHIDLSGGYYDAGDNMKFGFPLAFTTTMLAWGSVEMASQFQAHNEHQNVLMALKWATDYL IKAHPEPNVLYGQVGDGKLDHACWMRPEDMNTSHPRPSYRIDAQHPGADLAAETAAAMAAASLAFAPSDAAYANTLISHAKDLFEFGKNHPGVYHDSITN AAGFYSSSGHEDELLWAAAWLHRATGDQMYLDYLTQASNSGGVRSAFSWDDKFVGAQVLAAKVGKVKNEGKMAEYKSMAEHFICNCAQKGYSNVKKTPGG LLWFLPWENLQYTATASFVLSSYSKYLEAAQASVQCPNGVLQAFDLLSLARAQVDYILGSNPKSMSYMVGFGTNYPNRPHHRGSSIVSIKKDSKLKACNE GWYPWYNTHEPNPNVLVGAIVGGPDVNDVYQDERSDYQHNEPDTVTVAPFVGVFA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 477 Download |
| MCIVLLLLST SGKVSAGLNY GEALTKSLLY FEAQRSGKLP SDQRVQWRGD SAPGDGSDVH 60 IDLSGGYYDA GDNMKFGFPL AFTTTMLAWG SVEMASQFQA HNEHQNVLMA LKWATDYLIK 120 AHPEPNVLYG QVGDGKLDHA CWMRPEDMNT SHPRPSYRID AQHPGADLAA ETAAAMAAAS 180 LAFAPSDAAY ANTLISHAKD LFEFGKNHPG VYHDSITNAA GFYSSSGHED ELLWAAAWLH 240 RATGDQMYLD YLTQASNSGG VRSAFSWDDK FVGAQVLAAK VGKVKNEGKM AEYKSMAEHF 300 ICNCAQKGYS NVKKTPGGLL WFLPWENLQY TATASFVLSS YSKYLEAAQA SVQCPNGVLQ 360 AFDLLSLARA QVDYILGSNP KSMSYMVGFG TNYPNRPHHR GSSIVSIKKD SKLKACNEGW 420 YPWYNTHEPN PNVLVGAIVG GPDVNDVYQD ERSDYQHNEP DTVTVAPFVG VFAALA* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02613 | PLN02613 | 8.0e-165 | 1 | 475 | 481 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 1 | 476 | 480 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 19 | 473 | 463 | + Glycosyl hydrolase family 9. | ||
| PLN02171 | PLN02171 | 0 | 3 | 476 | 484 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 3 | 475 | 486 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF01119.1 | 0 | 1 | 387 | 11 | 399 | putative glucanase [Arabidopsis thaliana] |
| RefSeq | NP_181982.1 | 0 | 1 | 475 | 16 | 490 | AtGH9B9 (Arabidopsis thaliana glycosyl hydrolase 9B9); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_181983.1 | 0 | 1 | 473 | 16 | 487 | AtGH9B10 (Arabidopsis thaliana glycosyl hydrolase 9B10); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_181984.1 | 0 | 1 | 476 | 16 | 491 | AtGH9B11 (Arabidopsis thaliana glycosyl hydrolase 9B11); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_181985.1 | 0 | 1 | 476 | 15 | 492 | AtGH9B12 (Arabidopsis thaliana glycosyl hydrolase 9B12); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 19 | 475 | 4 | 428 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 1ksc_A | 0 | 19 | 475 | 4 | 428 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 1ks8_A | 0 | 19 | 475 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 18 | 475 | 4 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 18 | 475 | 4 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
