| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra000508 |
| Family | GH17 |
| Protein Properties | Length: 391 Molecular Weight: 43323.8 Isoelectric Point: 8.5572 |
| Chromosome | Chromosome/Scaffold: 03 Start: 11499784 End: 11501754 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 27 | 344 | 0 |
| VGINYGQIANNLPSPGRVAVLLRSLNITRVKLYDADPNVLFSFSNSQVDFMIGLGNEFLQNMSTDTTKAQSWIQQRLQPHISKTRITSIVVGNEIFKTND HVLISSLLPAMKAVYSALVSLGLEKQVTVTSAHSLDMLQTSYPPSSGSFKEEFIPYLQPLLDFHSQIKSPFLINAYPFFAYKDSPKEISLEYALFQPNQG MVDSNTNLHYDNMLFAQVDALYSAIKTLGHTDVEVRISETGWPSKGEENEIGASPENAALYNGNLLRLVQERKGTPAKPSVPIDVYVFALFNENLKPGPI SERNYGLFYPDGKPVYNV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 391 Download |
| MATRSLSFFR VLLLFLTLSV RSNGQGVGIN YGQIANNLPS PGRVAVLLRS LNITRVKLYD 60 ADPNVLFSFS NSQVDFMIGL GNEFLQNMST DTTKAQSWIQ QRLQPHISKT RITSIVVGNE 120 IFKTNDHVLI SSLLPAMKAV YSALVSLGLE KQVTVTSAHS LDMLQTSYPP SSGSFKEEFI 180 PYLQPLLDFH SQIKSPFLIN AYPFFAYKDS PKEISLEYAL FQPNQGMVDS NTNLHYDNML 240 FAQVDALYSA IKTLGHTDVE VRISETGWPS KGEENEIGAS PENAALYNGN LLRLVQERKG 300 TPAKPSVPID VYVFALFNEN LKPGPISERN YGLFYPDGKP VYNVGLQGYL PDIIYSSSAT 360 TIKILNVWRA VMGLAVAGMI LDMGVRMKMR * 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 2.0e-6 | 99 | 337 | 242 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-97 | 27 | 344 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001031432.1 | 0 | 77 | 390 | 1 | 314 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | NP_565652.1 | 0 | 19 | 390 | 21 | 392 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | NP_973548.1 | 0 | 19 | 364 | 21 | 366 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002328249.1 | 0 | 19 | 367 | 21 | 368 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523810.1 | 0 | 20 | 359 | 6 | 344 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 27 | 344 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 27 | 346 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 27 | 346 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 27 | 346 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 27 | 346 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
