| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra000536 |
| Family | GH17 |
| Protein Properties | Length: 379 Molecular Weight: 41788 Isoelectric Point: 8.6359 |
| Chromosome | Chromosome/Scaffold: 03 Start: 11625996 End: 11627294 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 31 | 349 | 0 |
| GINYGRIADNIPSPDKVVLLLKQAKIRNVRIYDADHTVLQAFSGTGLDLVVGLPNGFLKEMSSNADHALTWVKDNVHSFLPTTRIRGIAIGNEVLGGGDS ELSGALLGAAKNVYNALKKMNLEETVQITTAHSQAVFADSYPPSSCVFKDNVVQFMKPLLEFFDQIGSPFCLNAYPFLAYTYNPTQIDINYALFKPTEGI YDPKTNLRYDNMLDAQIDAAYMALEDAGFKEMEVMITETGWASKGDSDEPAATPENARTYNYNLRKRLAKKKGTPLRPKKVLKAYIFALFNENSKPGKSS ETHFGLYKPDGTISYDIGF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 379 Download |
| MRSSRLLLLN FLFFFFSPIL TAKGAFVGTY GINYGRIADN IPSPDKVVLL LKQAKIRNVR 60 IYDADHTVLQ AFSGTGLDLV VGLPNGFLKE MSSNADHALT WVKDNVHSFL PTTRIRGIAI 120 GNEVLGGGDS ELSGALLGAA KNVYNALKKM NLEETVQITT AHSQAVFADS YPPSSCVFKD 180 NVVQFMKPLL EFFDQIGSPF CLNAYPFLAY TYNPTQIDIN YALFKPTEGI YDPKTNLRYD 240 NMLDAQIDAA YMALEDAGFK EMEVMITETG WASKGDSDEP AATPENARTY NYNLRKRLAK 300 KKGTPLRPKK VLKAYIFALF NENSKPGKSS ETHFGLYKPD GTISYDIGFN SLKSFSSSKV 360 ASCYVALVIS ISVLLVMI* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.001 | 28 | 340 | 325 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 9.0e-100 | 31 | 349 | 319 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM67102.1 | 0 | 24 | 378 | 27 | 387 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
| GenBank | AAY25165.1 | 0 | 25 | 369 | 28 | 371 | beta-1,3-glucanase 1 [Ziziphus jujuba] |
| RefSeq | NP_565627.1 | 0 | 24 | 378 | 28 | 388 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | NP_850082.1 | 0 | 91 | 378 | 1 | 294 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002308978.1 | 0 | 25 | 357 | 4 | 336 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 31 | 350 | 3 | 316 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3f55_C | 0 | 31 | 350 | 3 | 316 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3f55_B | 0 | 31 | 350 | 3 | 316 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3f55_A | 0 | 31 | 350 | 3 | 316 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3em5_D | 0 | 31 | 350 | 3 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
