| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra000594 |
| Family | GH9 |
| Protein Properties | Length: 622 Molecular Weight: 69315.4 Isoelectric Point: 9.1411 |
| Chromosome | Chromosome/Scaffold: 03 Start: 11957278 End: 11959744 |
| Description | glycosyl hydrolase 9A1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 108 | 583 | 0 |
| NYTIALHKALKFFNAQKSGKLPRHNNVSWRGNSGLQDGKGDSGSFYKDLVGGYYDAGDAIKFNFPMAYAMTMLSWSVIEYSAKYEAAGELVHVKELIKWG TDYFLKTFNSTADSIDDLVSQVGSGNTDDGSTDPNDHYCWMRPEDMDYKRPVTTCNGGCSDLAAEMAAALASASIVFKDNREYSKKLVHGAKTVYQFGRT RRGRYSAGTAESAKFYNSSMYWDEFIWGGAWLYYATGNVTYLDLITKPTMAKHAGAFWGGPYYGVFSWDNKLAGAQLLLSRLRLFLSPGYPYEEILRTFH NQTSIVMCSYLPYFNKFNRTRGGLIELNHGDPQPLQYAANAAFLATLYSDYLDAADTPGWYCGPNFYSTNVLREFARTQIDYILGKNPRKMSYLVGFGTK YPKHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGPDRRDGFRDVRTNYNYTEPTLAGNAGLVAAL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 622 Download |
| MYGRDPWGGP LEIHATDSAT DDDRSRNLND IDRAALSRPL DETQQSWLLG PTEQKKKKYV 60 DLGCIIVSRK IFVWTVGTIV AAALLAGFIT LIVKTVPRHH RKTPPPDNYT IALHKALKFF 120 NAQKSGKLPR HNNVSWRGNS GLQDGKGDSG SFYKDLVGGY YDAGDAIKFN FPMAYAMTML 180 SWSVIEYSAK YEAAGELVHV KELIKWGTDY FLKTFNSTAD SIDDLVSQVG SGNTDDGSTD 240 PNDHYCWMRP EDMDYKRPVT TCNGGCSDLA AEMAAALASA SIVFKDNREY SKKLVHGAKT 300 VYQFGRTRRG RYSAGTAESA KFYNSSMYWD EFIWGGAWLY YATGNVTYLD LITKPTMAKH 360 AGAFWGGPYY GVFSWDNKLA GAQLLLSRLR LFLSPGYPYE EILRTFHNQT SIVMCSYLPY 420 FNKFNRTRGG LIELNHGDPQ PLQYAANAAF LATLYSDYLD AADTPGWYCG PNFYSTNVLR 480 EFARTQIDYI LGKNPRKMSY LVGFGTKYPK HVHHRGASIP KNKVKYNCKG GWKWRDSKKP 540 NPNTIEGAMV AGPDRRDGFR DVRTNYNYTE PTLAGNAGLV AALVALSGEE EASGTIDKNT 600 IFSAVPPLFP TPPPPPAPWK P* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02613 | PLN02613 | 3.0e-110 | 107 | 572 | 476 | + endoglucanase | ||
| PLN02266 | PLN02266 | 2.0e-110 | 78 | 571 | 507 | + endoglucanase | ||
| PLN02171 | PLN02171 | 8.0e-111 | 108 | 572 | 477 | + endoglucanase | ||
| PLN02345 | PLN02345 | 5.0e-137 | 112 | 572 | 470 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 1.0e-166 | 108 | 572 | 470 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK59818.1 | 0 | 1 | 605 | 1 | 605 | AT5g49720/K2I5_8 [Arabidopsis thaliana] |
| GenBank | AAM63370.1 | 0 | 1 | 605 | 1 | 605 | cellulase homolog OR16pep precursor [Arabidopsis thaliana] |
| GenBank | AAN72232.1 | 0 | 1 | 605 | 1 | 605 | At5g49720/K2I5_8 [Arabidopsis thaliana] |
| EMBL | CAB51903.1 | 0 | 1 | 605 | 1 | 605 | cellulase; endo-1,4-beta-D-glucanase [Brassica napus] |
| RefSeq | NP_199783.1 | 0 | 1 | 605 | 1 | 605 | ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 108 | 586 | 4 | 428 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 1ksc_A | 0 | 108 | 586 | 4 | 428 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 1ks8_A | 0 | 108 | 586 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 105 | 595 | 2 | 447 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 105 | 595 | 2 | 447 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
