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Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra000681 |
Family | GH100 |
Protein Properties | Length: 528 Molecular Weight: 60871.2 Isoelectric Point: 6.3822 |
Chromosome | Chromosome/Scaffold: 03 Start: 12425422 End: 12427766 |
Description | cytosolic invertase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH100 | 58 | 514 | 0 |
PHPMVAEAWEALRRSMVFFRGQPVGTIAAYDHASEEVLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLQLQGWEKRVDRFKLGEGVMPASFKVLHD PVRKTDTIVADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDLTLSETPECQRGIRLILSLCLSEGFDTFPTLLCADGCSMVDRRMGVYGYPIEIQALFF MALRSALSMLKHDEEGREFIEKIVKRLHALSFHMRNYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVMPDSIPDWVFDFMPLRGGYFVGNVSPARMDFRWF SLGNCVAILSSLATPDQSMAIMDLLEHRWEELVGEMPLKICYPCIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGRPQIARRAIDLIES RLHRDCWPEYYDGKLGRYVGKQARKYQTWSIAGYLVAKMMLEDPSHIGMISLEEDKQ |
Full Sequence |
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Protein Sequence Length: 528 Download |
MECPKEPLES QCSLSEMDDF DLTRALDKPR LKIEMKRSFD ERSFVDTPLS YVRNSFEPHP 60 MVAEAWEALR RSMVFFRGQP VGTIAAYDHA SEEVLNYDQV FVRDFVPSAL AFLMNGEPDI 120 VKNFLLKTLQ LQGWEKRVDR FKLGEGVMPA SFKVLHDPVR KTDTIVADFG ESAIGRVAPV 180 DSGFWWIILL RAYTKSTGDL TLSETPECQR GIRLILSLCL SEGFDTFPTL LCADGCSMVD 240 RRMGVYGYPI EIQALFFMAL RSALSMLKHD EEGREFIEKI VKRLHALSFH MRNYFWLDFQ 300 QLNDIYRYKT EEYSHTAVNK FNVMPDSIPD WVFDFMPLRG GYFVGNVSPA RMDFRWFSLG 360 NCVAILSSLA TPDQSMAIMD LLEHRWEELV GEMPLKICYP CIESHEWRIV TGCDPKNTRW 420 SYHNGGSWPV LLWMLTAACI KTGRPQIARR AIDLIESRLH RDCWPEYYDG KLGRYVGKQA 480 RKYQTWSIAG YLVAKMMLED PSHIGMISLE EDKQMKPVLK RSASWTC* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 0.0001 | 421 | 496 | 79 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
PLN03005 | PLN03005 | 0 | 10 | 527 | 540 | + beta-fructofuranosidase | ||
PLN02973 | PLN02973 | 0 | 8 | 527 | 554 | + beta-fructofuranosidase | ||
pfam12899 | Glyco_hydro_100 | 0 | 64 | 501 | 438 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
PLN02703 | PLN02703 | 0 | 64 | 516 | 458 | + beta-fructofuranosidase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABA08442.1 | 0 | 8 | 527 | 12 | 557 | neutral/alkaline invertase [Manihot esculenta] |
EMBL | CAB78074.1 | 0 | 2 | 527 | 3 | 566 | neutral invertase like protein [Arabidopsis thaliana] |
RefSeq | NP_174791.2 | 0 | 10 | 525 | 11 | 548 | CINV1 (cytosolic invertase 1); beta-fructofuranosidase [Arabidopsis thaliana] |
RefSeq | NP_567347.1 | 0 | 2 | 527 | 3 | 558 | beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative [Arabidopsis thaliana] |
RefSeq | XP_002327253.1 | 0 | 8 | 527 | 13 | 557 | predicted protein [Populus trichocarpa] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CK269009 | 329 | 198 | 526 | 0 |
ES848839 | 358 | 161 | 517 | 0 |
ES809234 | 324 | 188 | 511 | 0 |
ES810060 | 309 | 84 | 392 | 0 |
JG595544 | 299 | 147 | 445 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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