| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra000773 |
| Family | AA1 |
| Protein Properties | Length: 586 Molecular Weight: 65496.5 Isoelectric Point: 9.6731 |
| Chromosome | Chromosome/Scaffold: 03 Start: 12977547 End: 12980436 |
| Description | Cupredoxin superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 43 | 512 | 0 |
| QQVIAINGKFPGPTINVTTNENLVVNVRNKLDEGLLLHWSGIQQRRVSWQDGLAGTNCPIPPKWNWTYEFQVKDQIGSFFYFPSLHFQRASGGFGSFVVN PRSVIPVPFSTPHGDITITIGDWYTRNHTALRKALDDGKDLGMPDGVLINGKGPYQYNKTLVPDGIDFETITVHPGRTYRLRVSNVGISTSLNFRIQGHN LVLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARIVNETIWRRVTGVGILHYTNSKGKATGHLPPGPQDEFDKTFSMNQARSIRWN VSASGARPNPQGSFKYGSINVTEVYVLRNMPPVKINGKRRTTLSGISFVNPSTPIRLADKHKVKGVYKLDFPKRPLTGPPRRETSIINGTYRGFMEVILQ NNDTKMQSYHMSGYAFFAVGMDYGEWTENSRGTYNKWDGIARSTIQVYPGAWSAILISLDNPGAWNLRTE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 586 Download |
| MDVLKILLLM FFVNSRFCSA ADPYSFYNFE VSYITASPLG VPQQVIAING KFPGPTINVT 60 TNENLVVNVR NKLDEGLLLH WSGIQQRRVS WQDGLAGTNC PIPPKWNWTY EFQVKDQIGS 120 FFYFPSLHFQ RASGGFGSFV VNPRSVIPVP FSTPHGDITI TIGDWYTRNH TALRKALDDG 180 KDLGMPDGVL INGKGPYQYN KTLVPDGIDF ETITVHPGRT YRLRVSNVGI STSLNFRIQG 240 HNLVLAESEG SYTVQQNYTS LDIHVGQSYS FLVTMDQNAS SDYYIVASAR IVNETIWRRV 300 TGVGILHYTN SKGKATGHLP PGPQDEFDKT FSMNQARSIR WNVSASGARP NPQGSFKYGS 360 INVTEVYVLR NMPPVKINGK RRTTLSGISF VNPSTPIRLA DKHKVKGVYK LDFPKRPLTG 420 PPRRETSIIN GTYRGFMEVI LQNNDTKMQS YHMSGYAFFA VGMDYGEWTE NSRGTYNKWD 480 GIARSTIQVY PGAWSAILIS LDNPGAWNLR TENLDSWYLG QETYVRVVNP DENNKTEFGA 540 PANVLYCGAL SKLQKPQKIS SSATRSIEFT KVSMVVMALV MMLLL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02792 | PLN02792 | 9.0e-177 | 17 | 556 | 546 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 1.0e-180 | 20 | 551 | 542 | + copper ion binding / pectinesterase | ||
| PLN00044 | PLN00044 | 0 | 20 | 557 | 542 | + multi-copper oxidase-related protein; Provisional | ||
| PLN02354 | PLN02354 | 0 | 1 | 557 | 561 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 3 | 548 | 547 | + oxidoreductase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_192979.1 | 0 | 1 | 573 | 1 | 573 | SKU5; copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002266352.1 | 0 | 1 | 557 | 9 | 560 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002303520.1 | 0 | 1 | 584 | 1 | 588 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329905.1 | 0 | 4 | 584 | 8 | 588 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532575.1 | 0 | 6 | 582 | 10 | 584 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 27 | 552 | 6 | 543 | C Chain C, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation |
| PDB | 1asq_A | 0 | 27 | 552 | 6 | 543 | C Chain C, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation |
| PDB | 1asp_B | 0 | 27 | 552 | 6 | 543 | C Chain C, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation |
| PDB | 1asp_A | 0 | 27 | 552 | 6 | 543 | C Chain C, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation |
| PDB | 1aso_B | 0 | 27 | 552 | 6 | 543 | C Chain C, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation |
