| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra000835 |
| Family | GT14 |
| Protein Properties | Length: 332 Molecular Weight: 37856.4 Isoelectric Point: 8.4454 |
| Chromosome | Chromosome/Scaffold: 03 Start: 13412323 End: 13413740 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 2 | 243 | 0 |
| MRTLQAVYHPRNQYVLHLDLEAPPKERLELAMSVKNDPTFLEVANVRVMSQSNLVTYKGPTMIACTLQAVAVLLKESLDWDWFINLSASDYPLVTQDDLL YVFSNLSRSVNFIEHMKLTGWKLNQRAKSIIVDPGLYLSKKTEIAWTTQHRSIPTSFKLFTGSAWVVLTRSFLEYSILGWDNFPRTILMYYANFVSSPEG YFHTVICNTKEFKSTAIGHDLHYISWDYPPKQHPNSLSMKDF | |||
| Full Sequence |
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| Protein Sequence Length: 332 Download |
| MMRTLQAVYH PRNQYVLHLD LEAPPKERLE LAMSVKNDPT FLEVANVRVM SQSNLVTYKG 60 PTMIACTLQA VAVLLKESLD WDWFINLSAS DYPLVTQDDL LYVFSNLSRS VNFIEHMKLT 120 GWKLNQRAKS IIVDPGLYLS KKTEIAWTTQ HRSIPTSFKL FTGSAWVVLT RSFLEYSILG 180 WDNFPRTILM YYANFVSSPE GYFHTVICNT KEFKSTAIGH DLHYISWDYP PKQHPNSLSM 240 KDFDKMVKSK APFARKFHKD DPVLDKIDRE LLGRTHRFSS GAWCVGSSEN GSDPCSVRGD 300 DSVLRPGPGA ERLKELVQTL LSDEFRSKQC S* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 4.0e-73 | 1 | 247 | 251 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 3.0e-176 | 3 | 330 | 330 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28920.1 | 0 | 1 | 331 | 1 | 331 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001077453.1 | 0 | 1 | 331 | 28 | 358 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | NP_171851.1 | 0 | 1 | 331 | 117 | 447 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | NP_192243.1 | 0 | 1 | 331 | 118 | 448 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | XP_002517977.1 | 0 | 1 | 331 | 109 | 439 | acetylglucosaminyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.000000008 | 3 | 207 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.000000008 | 3 | 207 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.000000008 | 3 | 207 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.000000008 | 3 | 207 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.00000002 | 3 | 207 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EV546210 | 244 | 89 | 332 | 0 |
| FE696502 | 264 | 47 | 310 | 0 |
| DK535240 | 219 | 114 | 332 | 0 |
| DR478691 | 276 | 24 | 298 | 0 |
| DK554879 | 217 | 116 | 332 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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