| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra000907 |
| Family | GT77 |
| Protein Properties | Length: 311 Molecular Weight: 34917.1 Isoelectric Point: 9.4274 |
| Chromosome | Chromosome/Scaffold: 03 Start: 13859234 End: 13860657 |
| Description | Nucleotide-diphospho-sugar transferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT77 | 110 | 293 | 8.40779e-44 |
| QDKVLVIAEDYATLYKVNSKWPGHAVLIPPALDSQTAHNFCSQGFFNLTSRRPEHLLQLLELGYNVMYNDVDMVWLQDPFLYLEGNHDVYFMDDKTTIKP LSHSHDLPPSARNGRTNICSCLIFLRPTNGAKVLMKQWIKELHAQPWSKSNKGNDQPGFNWALGKTAHQVDVYLLSQAAFPTGE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 311 Download |
| MEKQRLFSSA SPLSYSSNSI LSRNSLLLLI TLLVILGVFL PWAGSPLFLF PNTYSPSSSS 60 SLPSKWDDYS LAKATKFVAK NGTLIVCTVS YPFFPFLNNW LISVSRQKHQ DKVLVIAEDY 120 ATLYKVNSKW PGHAVLIPPA LDSQTAHNFC SQGFFNLTSR RPEHLLQLLE LGYNVMYNDV 180 DMVWLQDPFL YLEGNHDVYF MDDKTTIKPL SHSHDLPPSA RNGRTNICSC LIFLRPTNGA 240 KVLMKQWIKE LHAQPWSKSN KGNDQPGFNW ALGKTAHQVD VYLLSQAAFP TGECTSGTRH 300 GLKRQRGNMS * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03407 | Nucleotid_trans | 2.0e-35 | 108 | 303 | 201 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005783 | endoplasmic reticulum |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAB61018.1 | 0 | 51 | 307 | 139 | 403 | A_IG002N01.8 gene product [Arabidopsis thaliana] |
| GenBank | AAK43874.1 | 0 | 51 | 284 | 68 | 296 | AF370497_1 unknown protein [Arabidopsis thaliana] |
| EMBL | CAN69309.1 | 0 | 33 | 307 | 1 | 269 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_567211.1 | 0 | 51 | 284 | 68 | 296 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_849279.1 | 0 | 51 | 307 | 68 | 319 | unknown protein [Arabidopsis thaliana] |
