| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra001025 |
| Family | GT8 |
| Protein Properties | Length: 531 Molecular Weight: 60872 Isoelectric Point: 9.1456 |
| Chromosome | Chromosome/Scaffold: 03 Start: 14434303 End: 14436756 |
| Description | galacturonosyltransferase 13 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 171 | 502 | 0 |
| CLSLRLTDEYTSNAHARRQLPSPELLPLLSDNAYHHFVLATDNILAASVVVSSAVQSSSKPEKIVFHVITDKKTYAGMHSWFALNSVAPAIVEVKSVHQF DWLTRENVPVLEAVESHHGIRNYYHGNHIAGANLSETTPRRFASKLQSRSPKYISLLNHLRIYLPELFPNLEKVVFLDDDIVIQRDLSPLWDIDLHGKVN GAVETCRGEDEWVMSKRFRTYFNFSHPLISQHLDPEECAWAYGMNIFDLRTWRKTNIRETYHSWLKANLKSNLTMWKLGTLPPALIAFKGHVQAIDSSWH MLGLGYQSNTNLENVKKAAVIHYNGQSKPWLE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 531 Download |
| MQLQISPSMR SITISSSNDL MKIKVAPRHI SYRTLFHTIL ILAFLLPFVF IVTALVTLEG 60 VNKCSSIDCL GRRLGPRFLS RIDDSEQRLV RDFYKILNEV STQDIPDGLK LPASFRQLVS 120 DMKNNHYDAK TFSLVLRAMI EKFERDIRES KFAELMNKHF AASSIPKGIH CLSLRLTDEY 180 TSNAHARRQL PSPELLPLLS DNAYHHFVLA TDNILAASVV VSSAVQSSSK PEKIVFHVIT 240 DKKTYAGMHS WFALNSVAPA IVEVKSVHQF DWLTRENVPV LEAVESHHGI RNYYHGNHIA 300 GANLSETTPR RFASKLQSRS PKYISLLNHL RIYLPELFPN LEKVVFLDDD IVIQRDLSPL 360 WDIDLHGKVN GAVETCRGED EWVMSKRFRT YFNFSHPLIS QHLDPEECAW AYGMNIFDLR 420 TWRKTNIRET YHSWLKANLK SNLTMWKLGT LPPALIAFKG HVQAIDSSWH MLGLGYQSNT 480 NLENVKKAAV IHYNGQSKPW LEIGFEHLRP FWTKYVNYSN DFIKSCHILE * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02829 | PLN02829 | 2.0e-129 | 117 | 528 | 412 | + Probable galacturonosyltransferase | ||
| PLN02742 | PLN02742 | 1.0e-134 | 126 | 528 | 410 | + Probable galacturonosyltransferase | ||
| PLN02867 | PLN02867 | 1.0e-173 | 25 | 529 | 509 | + Probable galacturonosyltransferase | ||
| PLN02870 | PLN02870 | 0 | 19 | 530 | 512 | + Probable galacturonosyltransferase | ||
| PLN02659 | PLN02659 | 0 | 19 | 528 | 511 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF26170.1 | 0 | 21 | 530 | 1 | 510 | AC008261_27 unknown protein [Arabidopsis thaliana] |
| EMBL | CAC01746.1 | 0 | 1 | 530 | 44 | 572 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_001118545.1 | 0 | 1 | 530 | 1 | 532 | GAUT13 (Galacturonosyltransferase 13); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_186753.2 | 0 | 1 | 530 | 1 | 533 | GAUT13 (Galacturonosyltransferase 13); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_197051.2 | 0 | 1 | 530 | 1 | 532 | GAUT14 (Galacturonosyltransferase 14); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ga8_A | 0.0000004 | 322 | 500 | 77 | 252 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1g9r_A | 0.0000004 | 322 | 500 | 77 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1ss9_A | 0.0000004 | 322 | 500 | 77 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
