| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra001229 |
| Family | GT1 |
| Protein Properties | Length: 633 Molecular Weight: 69287.8 Isoelectric Point: 6.3756 |
| Chromosome | Chromosome/Scaffold: 03 Start: 15432937 End: 15435743 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT1 | 196 | 602 | 0 |
| GTRGDVQPFVAIAKRLQDYGHRVRLATHANFKEFVLTAGLEFYPLGGDPKVLAEYMVKNKGFLPSGPSEIPIQRNQMKDIIYSLLPACKEPDPDSGIAFK ADAIIANPPAYGHTHVAEALKIPIHVFFTMPWTPTSEFPHPLSRVKQPAGYRLSYQIVDSLIWLGIRDMVNDLRKKKLKLRPVTYLSGTQSSGSNVPHGY MWSPHLVPKPKDWGPQIDVVGFCFLDLASNYEPPAELVEWLEAGDKPIYIGFGSLPVQEPEVMTEVIVEALQRTKQRGIINKGWGGLGNLKEPKDFVYLL DNVPHDWLFPRCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHDRGVGPPPIPVDEFSLHKLEDAINFMLDDKVKSSAETLAKAMKDEDGVA GAVKAFF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 633 Download |
| MPETSPANLD RAASSSSSSS SSSERASVKI EEIEGGGVIN GSQEAESQPE TTAASIVENA 60 LDESSGGGNK SFSRQWSVPM DRSTSNDRAE SSSLPSSKPR LHKSKTERHR KVTHILAEDA 120 AKIFDDRISA GKKLKLLNRI ANVKPDGTVV FEVPADSIPQ SIPLDREEDS KNGDEPIDGV 180 DFQYVPPMQI VMLIVGTRGD VQPFVAIAKR LQDYGHRVRL ATHANFKEFV LTAGLEFYPL 240 GGDPKVLAEY MVKNKGFLPS GPSEIPIQRN QMKDIIYSLL PACKEPDPDS GIAFKADAII 300 ANPPAYGHTH VAEALKIPIH VFFTMPWTPT SEFPHPLSRV KQPAGYRLSY QIVDSLIWLG 360 IRDMVNDLRK KKLKLRPVTY LSGTQSSGSN VPHGYMWSPH LVPKPKDWGP QIDVVGFCFL 420 DLASNYEPPA ELVEWLEAGD KPIYIGFGSL PVQEPEVMTE VIVEALQRTK QRGIINKGWG 480 GLGNLKEPKD FVYLLDNVPH DWLFPRCKAV VHHGGAGTTA AGLKAACPTT IVPFFGDQPF 540 WGERVHDRGV GPPPIPVDEF SLHKLEDAIN FMLDDKVKSS AETLAKAMKD EDGVAGAVKA 600 FFKHLPSTKQ DLQESIPEPS GFLSLRQCFG CS* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR01426 | MGT | 0.0007 | 193 | 605 | 428 | + glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. | ||
| COG1819 | COG1819 | 8.0e-36 | 187 | 609 | 435 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| pfam03033 | Glyco_transf_28 | 3.0e-38 | 190 | 334 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| cd03784 | GT1_Gtf_like | 4.0e-125 | 188 | 604 | 417 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL09737.1 | 0 | 96 | 632 | 17 | 555 | AT3g07020/F17A9_17 [Arabidopsis thaliana] |
| DDBJ | BAH56996.1 | 0 | 1 | 529 | 1 | 534 | AT3G07020 [Arabidopsis thaliana] |
| EMBL | CAB06082.1 | 0 | 1 | 632 | 1 | 637 | UDP-glucose:sterol glucosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_566297.2 | 0 | 1 | 632 | 1 | 637 | UDP-glucose:sterol glucosyltransferase (UGT80A2) [Arabidopsis thaliana] |
| RefSeq | NP_850529.1 | 0 | 1 | 632 | 1 | 637 | UDP-glucose:sterol glucosyltransferase (UGT80A2) [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 4e-32 | 188 | 612 | 1 | 388 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 3h4i_A | 4e-32 | 188 | 612 | 1 | 388 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1rrv_B | 2e-23 | 188 | 585 | 1 | 380 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 2e-23 | 188 | 585 | 1 | 380 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1iir_A | 2e-19 | 431 | 609 | 229 | 402 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GT046352 | 335 | 197 | 531 | 0 |
| GO883166 | 325 | 163 | 483 | 0 |
| DY295142 | 406 | 96 | 499 | 0 |
| CX664063 | 295 | 287 | 581 | 0 |
| GT046352 | 26 | 524 | 549 | 0.004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
