| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra001239 |
| Family | GT48 |
| Protein Properties | Length: 1908 Molecular Weight: 218832 Isoelectric Point: 9.0762 |
| Chromosome | Chromosome/Scaffold: 03 Start: 15466758 End: 15478832 |
| Description | glucan synthase-like 10 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT48 | 1034 | 1751 | 0 |
| VPRNLEARRRLQFFTNSLFMDVPPPKSVDKIVFTPYYSEVVLYSMAELTKRNEDGISILFYLQKIYPDEWKNFLARIGQDENALEGDLRNERDILELRFW ASYRGQTLARTVRGMMYYRKALMLQSYLERKAGRDGGESTLFGNNMTDAEGFELSPKARAQADLKFTYVVTCQIYGRQKEDKKPEAVDIALLMQRNEALR IAYIDVVDTPKDGISHTEYYSKLVKADINGKDKEIYSIRLPGDPKLGEGKPENQNHAIVFTRGNALQTIDMNQDNYFEEALKMRNLLEEFNRDHGIRPPT ILGVREHVFTGSVSSLASFMSNQETSFVTLGQRVLAKPLKIRMHYGHPDVFDRVFHITRGGISKASRVINISEDIFAGFNSTLRQGNITHHEYIQVGKGR DVGLNQIALFEGKVAGGNGEQVLSRDVYRLGQLLDFFRMLSFYFTTVGFYFSTMLTVLTLYIFLYGRAYLALSGVGDTLRERAISLDDTALSAALNAQFL FQIGVFTAVPMILGFILEQGFLKAIVSFTTMQFQLCTVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVKHITFSENYRLYSRSHFVKGLEVILLLVV YLAYGNDKAGAVSYILLTVSSWFLAGSWLFAPFLFNPAGFEWQKVVVDFTEWTNWLFYRGGIGVKGSESWEAWWEEELSHIRTLSGRIMETILSLRFFVF QYGIVYKLKLQGSDTSFS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1908 Download |
| MSRAESSWKR LVNAALQRDR AGGGAGGGTG QGSLMDYVPS SLPNNRDIDA ILRAADELQN 60 EDPSIARILC EHAYSLAQNL DPKSEGRGVL QFKTGLMSVV KQKLAKREVG TIDRTQDSKR 120 LQDFYRLYRE KNNVDTLKKE EMQLRESGVL TGELERKTVK RKRLFATLKI LGNVLEKVAK 180 EIPDELKHVI DSDAAISEDT IAYNIIPLEA HVTTNAITAF PEVKAAVAAL KYFRGLPNLP 240 ANFPIPATRN ADMLDFLHYI FGFQKDSVSN QREHIVLLLA NEQSRLNIPE EMEPKLDDAA 300 VHKVFLKSLD NYIKWCDYLG IKPAWSNLER ISGEKKLLFV SLYFLIWGEA ANIRFLPECL 360 CYIFHHMIVE MNEILRQQVS RPAVSCMPVD SHGGSDVGVS FLDHVIAPLY EVVSAEAFHN 420 ENGRAPHSEW RNYDDFNEYF WSLRSFELGW PWRTSSSFFQ KPIRRRKYEF EAGRDKHRGK 480 TSFVEHRTFL RLYHSFHRLW IFLAIMFQTS LQALAIIAFN KNSIISTKTL RQILSLGPTY 540 VVMKFSESLL DVIMMYGAFS TTRRLAVLRI FLRLIWFSLA CVFICFLYVK MLQEDTKPIY 600 NSVMFKVYGL VIAIYGGIQF LFTILMHIQI CRNIASKCDR WAVIRFVEGM RQERHYVGRD 660 MYERMSDFIK YFLFWLVVLS AKFSFAYFLQ IAPLVDPTRM IMKQDNIQYS WHEFVSIKNY 720 NALTVASLWA PVVAIYLLDI HIFYTIASAF FGFLLGARDR LGEIRSLEAI HKQFEEFPGA 780 FMKALHVPVT NRTFDPSHQA VDKNIVDATH FAPFWNQIIK CLREEDYITD LEMELLLMPK 840 KSGRLQLVQW PLFLLSSKIL LAKEIAAESN SQEEIVERIT RDGYMKYAVE EVYHALKLVL 900 TETLEAEGRM WVERIYEDID ASIKNRKIHN DFQLNKLSLV ITRVAALLGI LKENETPEHA 960 KGAIKALQDL YDVIRLDVLN VNMRGQYEMW NNLTQAWNEG RLFTELKWPK DPELKALVRR 1020 LYSLFTVKDS AAHVPRNLEA RRRLQFFTNS LFMDVPPPKS VDKIVFTPYY SEVVLYSMAE 1080 LTKRNEDGIS ILFYLQKIYP DEWKNFLARI GQDENALEGD LRNERDILEL RFWASYRGQT 1140 LARTVRGMMY YRKALMLQSY LERKAGRDGG ESTLFGNNMT DAEGFELSPK ARAQADLKFT 1200 YVVTCQIYGR QKEDKKPEAV DIALLMQRNE ALRIAYIDVV DTPKDGISHT EYYSKLVKAD 1260 INGKDKEIYS IRLPGDPKLG EGKPENQNHA IVFTRGNALQ TIDMNQDNYF EEALKMRNLL 1320 EEFNRDHGIR PPTILGVREH VFTGSVSSLA SFMSNQETSF VTLGQRVLAK PLKIRMHYGH 1380 PDVFDRVFHI TRGGISKASR VINISEDIFA GFNSTLRQGN ITHHEYIQVG KGRDVGLNQI 1440 ALFEGKVAGG NGEQVLSRDV YRLGQLLDFF RMLSFYFTTV GFYFSTMLTV LTLYIFLYGR 1500 AYLALSGVGD TLRERAISLD DTALSAALNA QFLFQIGVFT AVPMILGFIL EQGFLKAIVS 1560 FTTMQFQLCT VFFTFSLGTR THYFGRTILH GGARYQATGR GFVVKHITFS ENYRLYSRSH 1620 FVKGLEVILL LVVYLAYGND KAGAVSYILL TVSSWFLAGS WLFAPFLFNP AGFEWQKVVV 1680 DFTEWTNWLF YRGGIGVKGS ESWEAWWEEE LSHIRTLSGR IMETILSLRF FVFQYGIVYK 1740 LKLQGSDTSF SIYGWSWAAL AIFFFLFKVF TFSRKISVSF QLVLRLAQGI TFLVALAVVT 1800 VGVVLTDLSV TDIFATVLAL IPTGWGILSI ACAWKPIIKR IGMWKSIRSL ARLYDAGMGM 1860 LIFLPVAFCS WFPFLSTFQT RMMFNQAFSR GLEISLILAG NHPNSDL* 1920 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam14288 | FKS1_dom1 | 8.0e-49 | 334 | 453 | 121 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 1034 | 1774 | 832 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD25952.1 | 0 | 1 | 1907 | 1 | 1899 | AF085717_1 putative callose synthase catalytic subunit [Gossypium hirsutum] |
| RefSeq | NP_187372.4 | 0 | 1 | 1907 | 1 | 1941 | ATGSL10 (glucan synthase-like 10); 1,3-beta-glucan synthase [Arabidopsis thaliana] |
| Swiss-Prot | Q9SFU6 | 0 | 1 | 1907 | 1 | 1931 | CALS9_ARATH RecName: Full=Callose synthase 9; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 10 |
| RefSeq | XP_002285644.1 | 0 | 1 | 1907 | 1 | 1905 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002528123.1 | 0 | 1 | 1907 | 1 | 1914 | 1,3-beta-glucan synthase, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
