y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra001320 |
Family | GH1 |
Protein Properties | Length: 525 Molecular Weight: 59868.9 Isoelectric Point: 6.9781 |
Chromosome | Chromosome/Scaffold: 03 Start: 15835349 End: 15838184 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 37 | 511 | 0 |
RASFPEGFLFGTATAAYQVEGAVNETCRGPALWDIYCKRYPARCNNDNGDVAVDFFHRYKDDIQLMKNLNTDAFRMSIAWPRIFPHGRKEKGVSQAGVQF YHDVIDELIKNGITPFVTVYHWDTPQDLEDEYGGFLSERIVKDFREYADFVFQEYGGKVKHWITFNEPWVFSHAGYDVGKKAPGRCSKYVKEECQEGRSG FEAYLVTHNLLNSHAEAVEAFRQCEKCKGGKIGIAHSPAWFEPHDLADSQDGASIDRALQFILGWHLDTTIYGDYPQIMKDIVGHRLPKFTDAQKAKLKN SADFVGLNYYTSVFSNHLEKPDPSKPRWMQDSLINWESKNAQNFSIGSKPFTAALPVYARGFRSLLKYIKDKYANPEIMIMENGYGEELGATDSVEVGTA DHNRKYYIQRHLLSLNEAICIDKVNVTGYFVWSLMDNFEWQDGYKNRFGLYYVDFKNNLARHVKESGKYYKEFLS |
Full Sequence |
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Protein Sequence Length: 525 Download |
MALHKFPLMG LLMLLTIVVS PATADGPVCP PSTKLSRASF PEGFLFGTAT AAYQVEGAVN 60 ETCRGPALWD IYCKRYPARC NNDNGDVAVD FFHRYKDDIQ LMKNLNTDAF RMSIAWPRIF 120 PHGRKEKGVS QAGVQFYHDV IDELIKNGIT PFVTVYHWDT PQDLEDEYGG FLSERIVKDF 180 REYADFVFQE YGGKVKHWIT FNEPWVFSHA GYDVGKKAPG RCSKYVKEEC QEGRSGFEAY 240 LVTHNLLNSH AEAVEAFRQC EKCKGGKIGI AHSPAWFEPH DLADSQDGAS IDRALQFILG 300 WHLDTTIYGD YPQIMKDIVG HRLPKFTDAQ KAKLKNSADF VGLNYYTSVF SNHLEKPDPS 360 KPRWMQDSLI NWESKNAQNF SIGSKPFTAA LPVYARGFRS LLKYIKDKYA NPEIMIMENG 420 YGEELGATDS VEVGTADHNR KYYIQRHLLS LNEAICIDKV NVTGYFVWSL MDNFEWQDGY 480 KNRFGLYYVD FKNNLARHVK ESGKYYKEFL SQGVRPSMIK KDEL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 2.0e-108 | 12 | 511 | 505 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 4.0e-117 | 11 | 510 | 503 | + beta-glucosidase | ||
COG2723 | BglB | 2.0e-134 | 40 | 508 | 481 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 2.0e-144 | 41 | 506 | 472 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 1.0e-173 | 36 | 511 | 480 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB38783.1 | 0 | 1 | 524 | 1 | 525 | beta-glucosidase [Arabidopsis thaliana] |
GenBank | AAB38784.1 | 0 | 88 | 524 | 1 | 437 | beta-glucosidase [Brassica nigra] |
DDBJ | BAH20034.1 | 0 | 1 | 524 | 1 | 524 | AT3G09260 [Arabidopsis thaliana] |
EMBL | CAA61592.1 | 0 | 1 | 524 | 1 | 524 | thioglucoside glucohydrolase [Arabidopsis thaliana] |
RefSeq | NP_187537.1 | 0 | 1 | 524 | 1 | 524 | PYK10; beta-glucosidase/ copper ion binding / fucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 30 | 510 | 27 | 503 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptq_A | 0 | 30 | 510 | 27 | 503 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptm_B | 0 | 30 | 510 | 27 | 503 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptm_A | 0 | 30 | 510 | 27 | 503 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptk_B | 0 | 30 | 510 | 27 | 503 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |