| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra001338 |
| Family | GT75 |
| Protein Properties | Length: 365 Molecular Weight: 41570.8 Isoelectric Point: 5.4738 |
| Chromosome | Chromosome/Scaffold: 03 Start: 15914439 End: 15915898 |
| Description | reversibly glycosylated polypeptide 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT75 | 14 | 350 | 0 |
| LKDELDIVIPTIRNLDFLEMWRPFFEQYHLIIVQDGDPSRTINIPKGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAK DPSGKEINALEQHIKNLLTPSTPHFFNTLYDPYGDGADFVRGYPFSMREGAITAVSHGLWLNIPDYDAPTQLVKPLERNSRKYVDAVMTIPKGTLFPMCG MNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHMGWGVKTGLPYIWHSKASNPFVNLRKEYNGIFWQEEAIPFFQSLALPKECTSVQQCY MEMAKLVKEKLGKVDPYFNKLADGMVTWIEAWEELNS | |||
| Full Sequence |
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| Protein Sequence Length: 365 Download |
| MAQLYSSVKP TPMLKDELDI VIPTIRNLDF LEMWRPFFEQ YHLIIVQDGD PSRTINIPKG 60 FDYELYNRND INRILGPKAS CISFKDSACR CFGYMVSKKK YIYTIDDDCF VAKDPSGKEI 120 NALEQHIKNL LTPSTPHFFN TLYDPYGDGA DFVRGYPFSM REGAITAVSH GLWLNIPDYD 180 APTQLVKPLE RNSRKYVDAV MTIPKGTLFP MCGMNLAFDR ELIGPAMYFG LMGDGQPIGR 240 YDDMWAGWCV KVICDHMGWG VKTGLPYIWH SKASNPFVNL RKEYNGIFWQ EEAIPFFQSL 300 ALPKECTSVQ QCYMEMAKLV KEKLGKVDPY FNKLADGMVT WIEAWEELNS PDGAEAKAPK 360 GKDE* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03180 | PLN03180 | 0 | 6 | 351 | 346 | + reversibly glycosylated polypeptide; Provisional | ||
| pfam03214 | RGP | 0 | 14 | 350 | 342 | + Reversibly glycosylated polypeptide. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0007047 | : GO:0044234 |
| GO:0008466 | glycogenin glucosyltransferase activity |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030054 | cell junction |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF07834.1 | 0 | 1 | 363 | 1 | 373 | AC010871_10 putative reversibly glycosylatable polypeptide [Arabidopsis thaliana] |
| GenBank | ABK21236.1 | 0 | 10 | 361 | 6 | 357 | unknown [Picea sitchensis] |
| RefSeq | NP_187502.2 | 0 | 1 | 363 | 1 | 362 | RGP3 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 3); transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002311350.1 | 0 | 6 | 361 | 4 | 358 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512057.1 | 0 | 6 | 361 | 5 | 360 | Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CU575244 | 361 | 6 | 365 | 0 |
| CU572514 | 357 | 6 | 361 | 0 |
| HO810375 | 361 | 1 | 361 | 0 |
| HO852574 | 358 | 4 | 361 | 0 |
| HO779006 | 353 | 11 | 361 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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