y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra001503 |
Family | AA1 |
Protein Properties | Length: 556 Molecular Weight: 62272.9 Isoelectric Point: 9.2424 |
Chromosome | Chromosome/Scaffold: 03 Start: 16708750 End: 16710735 |
Description | SKU5 similar 12 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 44 | 504 | 0 |
VPQQVILINGQFPGPNINSTSNNNVIINVFNNLDEPFLLTWNGIQHRKNCWQDGTQGTMCPIMPGTNYTYHFQPKDQIGSYFYYPTTGMHRAAGGYGGLR VNSRLLIPVPYADPEDDYTVLIGDWFTKSHTQLKKFLDGGRTIGRPDGIVINGKSGKGDGSDAPLFTLKPGKTYRVRICNVGIKTSLNFRIQNHKMKLVE MEGSHVLQNDYDSLDVHVGQCYGTIVAANQEPKDYYMVASTRFLKKVITTTGLLRYEGGKGPASSQLPAGPVGWAWSLNQFRSFRWNLTASAARPNPQGS YHYGKINITRTIKLVNTQGKIDGKLRYALNGVSHTEPETPLKLAEYFGITDKVFKYDIITDNPTPEQIKNIKIEPNVLNITHRTFVEVVFENHEKSVQSW HLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHTIQVYPKCWAAILLTFDNCGMWNIRSE |
Full Sequence |
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Protein Sequence Length: 556 Download |
MRGVKLLAAC LYLAAAATVV VRAEDPYFHH VWNVTYGTAS PLGVPQQVIL INGQFPGPNI 60 NSTSNNNVII NVFNNLDEPF LLTWNGIQHR KNCWQDGTQG TMCPIMPGTN YTYHFQPKDQ 120 IGSYFYYPTT GMHRAAGGYG GLRVNSRLLI PVPYADPEDD YTVLIGDWFT KSHTQLKKFL 180 DGGRTIGRPD GIVINGKSGK GDGSDAPLFT LKPGKTYRVR ICNVGIKTSL NFRIQNHKMK 240 LVEMEGSHVL QNDYDSLDVH VGQCYGTIVA ANQEPKDYYM VASTRFLKKV ITTTGLLRYE 300 GGKGPASSQL PAGPVGWAWS LNQFRSFRWN LTASAARPNP QGSYHYGKIN ITRTIKLVNT 360 QGKIDGKLRY ALNGVSHTEP ETPLKLAEYF GITDKVFKYD IITDNPTPEQ IKNIKIEPNV 420 LNITHRTFVE VVFENHEKSV QSWHLDGYSF FAVAVEPGTW TPEKRKNYNL LDAVSRHTIQ 480 VYPKCWAAIL LTFDNCGMWN IRSENSERRY LGQQLYASIL SPEKSLRDEY NMPETSLQCG 540 LVKNTPKPVN PYAGA* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02354 | PLN02354 | 0 | 24 | 554 | 531 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 24 | 540 | 518 | + oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 24 | 540 | 517 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 24 | 549 | 529 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 26 | 543 | 530 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA47177.1 | 0 | 1 | 555 | 1 | 555 | Bplo [Brassica napus] |
EMBL | CAA47178.1 | 0 | 1 | 555 | 1 | 555 | Bplo [Brassica napus] |
RefSeq | NP_175953.1 | 0 | 3 | 555 | 4 | 555 | sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | NP_187947.1 | 0 | 1 | 555 | 1 | 554 | sks11 (SKU5 Similar 11); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
Swiss-Prot | Q00624 | 0 | 1 | 555 | 1 | 555 | ASOL_BRANA RecName: Full=L-ascorbate oxidase homolog; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 29 | 540 | 5 | 539 | A Chain A, Mason-Pfizer Monkey Virus Matrix Protein, Nmr, Average Structure |
PDB | 1asq_A | 0 | 29 | 540 | 5 | 539 | A Chain A, Mason-Pfizer Monkey Virus Matrix Protein, Nmr, Average Structure |
PDB | 1asp_B | 0 | 29 | 540 | 5 | 539 | A Chain A, Mason-Pfizer Monkey Virus Matrix Protein, Nmr, Average Structure |
PDB | 1asp_A | 0 | 29 | 540 | 5 | 539 | A Chain A, Mason-Pfizer Monkey Virus Matrix Protein, Nmr, Average Structure |
PDB | 1aso_B | 0 | 29 | 540 | 5 | 539 | A Chain A, Mason-Pfizer Monkey Virus Matrix Protein, Nmr, Average Structure |