y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra001816 |
Family | GH47 |
Protein Properties | Length: 572 Molecular Weight: 64866.9 Isoelectric Point: 8.3411 |
Chromosome | Chromosome/Scaffold: 03 Start: 18617180 End: 18620246 |
Description | alpha-mannosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 104 | 536 | 0 |
AMIHAWSSYEKYAWGKDELQPQTKDGVDSFGGLGATIIDALDTLYIMGLHEQFQKAREWVAASLDFDKDYDASMFETTIRVVGGLLSSYDLSGDKLFLEK AKDIADRLLPAWDTPSGIPYNIINLRHGNAHNPTWGGGDSNLAESGTEQLEFIALSQRTGDPKYQQKVEKVITVLNKNYPADGLLPVYINPDTAEPSYST ITFGGGGDSFYEYLLKVWVFGNKTLTVKHYRDMWEKSMNGLLSLVKKSTPSSFTYICEKSGSSLTHKMDELACFAPGMLALGSSGYDDPTHAKKFLTLAE ELAWTCYNFYESTPTKLAGENYVFNSGSDMSVGASSNILRPETVESLFYLWRLTGNKTYQDWGWNIFEAFEKNSRIETGYVGLKDVNTGVKDNKMQSFFL AETLKYLYLLFSPATVIPLDEWVFNTEAHPLKI |
Full Sequence |
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Protein Sequence Length: 572 Download |
MARSRLVTGH GIWKYVNPAY NLGRTMRLAL LFILFISVSM VVWDRQTRAR DHEFEVLKLN 60 KQVLRLQLML GDVKSVKEDA TMRTLKSVKE EPVDARRRQR VKEAMIHAWS SYEKYAWGKD 120 ELQPQTKDGV DSFGGLGATI IDALDTLYIM GLHEQFQKAR EWVAASLDFD KDYDASMFET 180 TIRVVGGLLS SYDLSGDKLF LEKAKDIADR LLPAWDTPSG IPYNIINLRH GNAHNPTWGG 240 GDSNLAESGT EQLEFIALSQ RTGDPKYQQK VEKVITVLNK NYPADGLLPV YINPDTAEPS 300 YSTITFGGGG DSFYEYLLKV WVFGNKTLTV KHYRDMWEKS MNGLLSLVKK STPSSFTYIC 360 EKSGSSLTHK MDELACFAPG MLALGSSGYD DPTHAKKFLT LAEELAWTCY NFYESTPTKL 420 AGENYVFNSG SDMSVGASSN ILRPETVESL FYLWRLTGNK TYQDWGWNIF EAFEKNSRIE 480 TGYVGLKDVN TGVKDNKMQS FFLAETLKYL YLLFSPATVI PLDEWVFNTE AHPLKIVPWK 540 DQVNPGQSNS VQQRKPRVSL RKRRFGRMEH K* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01532 | Glyco_hydro_47 | 0 | 104 | 536 | 452 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
PTZ00470 | PTZ00470 | 0 | 91 | 538 | 458 | + glycoside hydrolase family 47 protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK92711.1 | 0 | 1 | 571 | 1 | 572 | putative mannosidase [Arabidopsis thaliana] |
DDBJ | BAB01459.1 | 0 | 1 | 571 | 1 | 581 | alpha 1,2-mannosidase-like protein [Arabidopsis thaliana] |
RefSeq | NP_175570.1 | 0 | 1 | 567 | 1 | 556 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
RefSeq | NP_566675.1 | 0 | 1 | 571 | 1 | 572 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
RefSeq | XP_002310939.1 | 0 | 1 | 523 | 1 | 524 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 0 | 91 | 537 | 11 | 466 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1fmi_A | 0 | 92 | 536 | 4 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo3_A | 0 | 92 | 536 | 4 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo2_A | 0 | 92 | 536 | 4 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1x9d_A | 0 | 92 | 536 | 82 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |