| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra001912 |
| Family | AA3 |
| Protein Properties | Length: 741 Molecular Weight: 81179.9 Isoelectric Point: 7.3698 |
| Chromosome | Chromosome/Scaffold: 03 Start: 19314344 End: 19319507 |
| Description | fatty alcohol oxidase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 202 | 735 | 7.00649e-45 |
| QETEQTLVESLAQKGLEAETDHDTIRIKCDAVVVGSGSGGGVAASVLAKAGMKVVVMEKGSYYTPSTYPSTEGPGMNKLYENGGILPTIDGNMMVLAGAT VGGGSAVNWSACIKTPKSVLQEWSEDRKIPLYATKEYVSAMELVWKRIGVTETCELEGFQNQVLRKGCENLGINVENVARNSSERHYCGSCGYGCRQGDK KGSDRTWLVDAVSHGAVILTGCKAERFILEKNGNNVGRKKMKCLGVMAKSLNGNIAKKIKIEARVTVSAAGSLLTPPLMIKSGLKNRHIGKNLHLHPVLM TWGYFPNKESSSFNFKGRSYEGGIITSMSKVLSEDSEVRAIIETPALGPASFSVLCPWISGLDMKKRMSRYSRTANLITIVRDRGSGEVRTEGRISYVVD KIDRENITAGLRQSLRILIAAGAEEVGTHRSDGQKLICKGVDEKLIEEFLDSVSAEEGPKAMTENWSVYSSAHQMGSCRIGVDEDEGAIDLDGESWEADK LFVCDGSVLPSAVGVNPMITIMSTAYCISTRIVK | |||
| Full Sequence |
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| Protein Sequence Length: 741 Download |
| MGNNIDTGNF GHLGITTAEM ESLASFCEAV LPPVSPPEEY SGGDDHYRNK ETLRSFFFTS 60 GSRTPVVRES IELITKRGTV ETYLVTRLVL FLLATRLGTL LICGTECLVS RWPFVEKFSE 120 LSLEKRERVL QKQFRNWLLT PIRAAFVYIK VAFLFCFFSR VSPNGENLAW EAIGYNVNTN 180 ENKPSETHKE RPLEKGMVET MQETEQTLVE SLAQKGLEAE TDHDTIRIKC DAVVVGSGSG 240 GGVAASVLAK AGMKVVVMEK GSYYTPSTYP STEGPGMNKL YENGGILPTI DGNMMVLAGA 300 TVGGGSAVNW SACIKTPKSV LQEWSEDRKI PLYATKEYVS AMELVWKRIG VTETCELEGF 360 QNQVLRKGCE NLGINVENVA RNSSERHYCG SCGYGCRQGD KKGSDRTWLV DAVSHGAVIL 420 TGCKAERFIL EKNGNNVGRK KMKCLGVMAK SLNGNIAKKI KIEARVTVSA AGSLLTPPLM 480 IKSGLKNRHI GKNLHLHPVL MTWGYFPNKE SSSFNFKGRS YEGGIITSMS KVLSEDSEVR 540 AIIETPALGP ASFSVLCPWI SGLDMKKRMS RYSRTANLIT IVRDRGSGEV RTEGRISYVV 600 DKIDRENITA GLRQSLRILI AAGAEEVGTH RSDGQKLICK GVDEKLIEEF LDSVSAEEGP 660 KAMTENWSVY SSAHQMGSCR IGVDEDEGAI DLDGESWEAD KLFVCDGSVL PSAVGVNPMI 720 TIMSTAYCIS TRIVKSINEL * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02462 | pyranose_ox | 0.003 | 674 | 726 | 53 | + pyranose oxidase. Pyranose oxidase (also called glucose 2-oxidase) converts D-glucose and molecular oxygen to 2-dehydro-D-glucose and hydrogen peroxide. Peroxide production is believed to be important to the wood rot fungi in which this enzyme is found for lignin degradation. | ||
| pfam05199 | GMC_oxred_C | 1.0e-19 | 595 | 729 | 135 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 2.0e-23 | 248 | 735 | 547 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 1.0e-91 | 277 | 499 | 226 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016491 | oxidoreductase activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAC87643.1 | 0 | 69 | 737 | 2 | 672 | alcohol oxidase [Arabidopsis thaliana] |
| EMBL | CAN71289.1 | 0 | 8 | 739 | 16 | 737 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_566729.1 | 0 | 8 | 737 | 8 | 740 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002285334.1 | 0 | 8 | 739 | 16 | 737 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002314488.1 | 0 | 20 | 737 | 1 | 713 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1naa_B | 0.0003 | 231 | 498 | 4 | 279 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
| PDB | 1naa_A | 0.0003 | 231 | 498 | 4 | 279 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
| PDB | 1kdg_B | 0.0004 | 231 | 498 | 9 | 284 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO794753 | 627 | 111 | 733 | 0 |
| HO779224 | 460 | 202 | 659 | 0 |
| DK534935 | 245 | 494 | 738 | 0 |
| ES815664 | 354 | 330 | 682 | 0 |
| FD936762 | 234 | 505 | 738 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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