| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra002311 |
| Family | GH17 |
| Protein Properties | Length: 349 Molecular Weight: 37992.6 Isoelectric Point: 5.6286 |
| Chromosome | Chromosome/Scaffold: 10 Start: 10373124 End: 10374170 |
| Description | beta-1,3-glucanase 5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 37 | 347 | 0 |
| VGLNYGLLGDNLPSPSDVISLYKSIGITKIRIFDPNTDVLNVLRGHHEIELTVGIKDQDLAALAASEEAVKGWFATNIEPYLADVNITFITVGNEVIPGP IGPQVLPVMQSLTNLVKSKSLTISVTTVVAMSNLGQSYPPSAGMFTPQSREQLVPVLKFLSQARTPILVNIYPYFAYASNPVNISLDYATFNAKTVVVED GAMQYTNMFDAIFDAFVWAMEKDGVKDVSMVVSETGWPSAGNGNLTTPEIAAMYNGNFVKHVRSGKGTPKRPNCSVTGFIFATFNENQKPVGTEEHFGLY EPTDLKPIYKL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 349 Download |
| MDCPSPNKLF LFLLSWIATL FGIKHHGPVN MGTTTNVGLN YGLLGDNLPS PSDVISLYKS 60 IGITKIRIFD PNTDVLNVLR GHHEIELTVG IKDQDLAALA ASEEAVKGWF ATNIEPYLAD 120 VNITFITVGN EVIPGPIGPQ VLPVMQSLTN LVKSKSLTIS VTTVVAMSNL GQSYPPSAGM 180 FTPQSREQLV PVLKFLSQAR TPILVNIYPY FAYASNPVNI SLDYATFNAK TVVVEDGAMQ 240 YTNMFDAIFD AFVWAMEKDG VKDVSMVVSE TGWPSAGNGN LTTPEIAAMY NGNFVKHVRS 300 GKGTPKRPNC SVTGFIFATF NENQKPVGTE EHFGLYEPTD LKPIYKLF* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 9.0e-5 | 114 | 337 | 237 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 6.0e-106 | 37 | 347 | 314 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM62473.1 | 0 | 5 | 348 | 4 | 345 | beta-1,3-glucanase bg4 [Arabidopsis thaliana] |
| RefSeq | NP_174592.1 | 0 | 5 | 348 | 4 | 335 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| RefSeq | NP_197533.1 | 0 | 5 | 348 | 4 | 345 | BETAG4; catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_197534.1 | 0 | 6 | 348 | 5 | 354 | BG5 (beta-1,3-glucanase 5); glucan 1,3-beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_197539.1 | 0 | 1 | 348 | 1 | 344 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 37 | 347 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 37 | 342 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 37 | 342 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 37 | 342 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 37 | 342 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
