Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra002332 |
Family | GT4 |
Protein Properties | Length: 787 Molecular Weight: 90167.6 Isoelectric Point: 6.3732 |
Chromosome | Chromosome/Scaffold: 10 Start: 10261837 End: 10265224 |
Description | sucrose synthase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 546 | 713 | 0 |
LKDKKKPILFTMARLDRVKNLSGLVEWYGKNKRLRDLVNLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMNRVRNGELYRYICDTKG AFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKED |
Full Sequence |
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Protein Sequence Length: 787 Download |
MVNGVLTRVH SQRERLSETL VAQRNEVLAL LSRLCLKKPE KKIEGGAFFD LLKTTQEAIV 60 LPPWVALAVR PRPGVWEYIR VNLHALVVEE LTPAEFLHFK EELVDGVKNG DFTLELDFEP 120 FNASVPRPTL PKYIGDGVEF LNRHLSAKLF HDKESLLPLL KFLRLHSHQG KTLMLNERVQ 180 NLNSLQHILR KAEEYLAGLA PETPYEDFEA KFEEIGLERG WGNNAERVLD MIRLLLDLLE 240 APDPCTLENF LGRVPMVFNV VILSPHGYFA QDNVLGYPDT GGQVVYILDQ VRAMETEMLQ 300 RIQQQGLNIT PRILILTRLL PDAVGTTCGE RLERVDGSEY CDILRVPFRT EKGIVRKWIS 360 RFEVWPYLET YTEDAAVELA KELKGKPDLI IGNYSDGNLV ASLLAHKLGV TQCTIAHALE 420 KTKYPDSDIY WKKLDDKYHF SCQFTADLFA MNHTDFIITS TLQEIAGSKD TVGQYESHTA 480 FTLPGLYRVV HGIDVFDPKF NIVSPGADMS IYFPYTEEKR RLTKFHPEIE ELLYSNVENE 540 EHLCVLKDKK KPILFTMARL DRVKNLSGLV EWYGKNKRLR DLVNLVVVGG DRRKESKDNE 600 EKAEMKKMYD LIEEYKLNGQ FRWISSQMNR VRNGELYRYI CDTKGAFVQP ALYEAFGLTV 660 VEAMTCGLPT FATCKGGPAE IIVHGKSGFH IDPYHGDQAA DTLADFFTKC KEDPSHWDQI 720 SKGGLQRIEE KYTWQIYSQR LLTLTGVYGF WKHVSNLDRL ESRRYLEMFY ALKYRPLAQA 780 VPLAQE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 3.0e-60 | 260 | 744 | 494 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 3.0e-124 | 259 | 743 | 488 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 1 | 786 | 808 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 5 | 784 | 783 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 7 | 535 | 550 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACV72640.1 | 0 | 1 | 786 | 1 | 805 | sucrose synthase 1 [Gossypium hirsutum] |
DDBJ | BAA89049.1 | 0 | 1 | 786 | 1 | 805 | sucrose synthase [Citrus unshiu] |
EMBL | CAA50317.1 | 0 | 5 | 786 | 7 | 806 | sucrose synthase [Arabidopsis thaliana] |
RefSeq | NP_197583.1 | 0 | 5 | 786 | 7 | 807 | SUS1 (SUCROSE SYNTHASE 1); UDP-glycosyltransferase/ sucrose synthase [Arabidopsis thaliana] |
RefSeq | NP_566865.2 | 0 | 5 | 786 | 7 | 807 | SUS4; UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 5 | 786 | 7 | 807 | A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin |
PDB | 3s29_G | 0 | 5 | 786 | 7 | 807 | A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin |
PDB | 3s29_F | 0 | 5 | 786 | 7 | 807 | A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin |
PDB | 3s29_E | 0 | 5 | 786 | 7 | 807 | A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin |
PDB | 3s29_D | 0 | 5 | 786 | 7 | 807 | A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794519 | 806 | 1 | 787 | 0 |
BU103683 | 802 | 5 | 786 | 0 |
CX109054 | 594 | 86 | 679 | 0 |
FG227316 | 453 | 257 | 709 | 0 |
GW837855 | 430 | 305 | 734 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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