Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra002346 |
Family | GH3 |
Protein Properties | Length: 611 Molecular Weight: 66410.5 Isoelectric Point: 7.4645 |
Chromosome | Chromosome/Scaffold: 10 Start: 10169638 End: 10172422 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 105 | 323 | 0 |
LSTRLGIPMIYGIDAVHGHNNVDPMLLKRIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDYRIVQEMTEIITGLQGDLPTERRGVPFVGGK SKVAACAKHFVGDGGTVRGIDENNTVIDSNGLYGIHMPGYYKAINKGVATVMVSYSALNDLRMHANKELVTGFLKDKLKFRGFVISDWQGIDRITNPPHL NYSYSVYAGISAGIDMIMV |
Full Sequence |
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Protein Sequence Length: 611 Download |
METLSKALCL LLLFCTLAAA DTGGAPKYKD PKQPLGARIR DLMNRMTLQE KIGQMVQIER 60 TVATPDVMKN YFIGSVLSGG GSVPAPKATP EAWVNMVNEI QKAALSTRLG IPMIYGIDAV 120 HGHNNVDPML LKRIGEATAL EVRATGIPYA FAPCIAVCRD PRWGRCYESY SEDYRIVQEM 180 TEIITGLQGD LPTERRGVPF VGGKSKVAAC AKHFVGDGGT VRGIDENNTV IDSNGLYGIH 240 MPGYYKAINK GVATVMVSYS ALNDLRMHAN KELVTGFLKD KLKFRGFVIS DWQGIDRITN 300 PPHLNYSYSV YAGISAGIDM IMVPYNYTEF IDEINSQIKS NLIPMSRIDD AVKRILRVKF 360 TMGLFEEPLA DLTFANQLGS KEHRELAREA VRKSLVLLKN GKKGDKPLLP LPKKTGKILV 420 AGTHADNLGY QCGGWTITWQ GLDGNDLTIG TTILAAVKNT VAPTTQVVYN QNPDANFVKS 480 GEFDYAVVVV GEPPYAEMYG DSTNLTISEP GPSTIGNVCG GVKCVVVVVS GRPVVMEPYV 540 STIDALVAAW LPGTEGQGVA DALFGDYGFT GKLARTWFKS VEQLPMNVGD QHYDPLYPFG 600 FGLTTQPSKL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 3.0e-11 | 544 | 604 | 83 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-30 | 420 | 604 | 204 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-49 | 31 | 396 | 397 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 6.0e-63 | 46 | 438 | 420 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 5.0e-80 | 47 | 358 | 332 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ17461.1 | 0 | 27 | 608 | 27 | 625 | beta-D-glucosidase [Gossypium hirsutum] |
EMBL | CAA07070.1 | 0 | 8 | 608 | 9 | 626 | beta-D-glucosidase [Tropaeolum majus] |
RefSeq | NP_197595.2 | 0 | 1 | 610 | 1 | 624 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002313632.1 | 0 | 1 | 609 | 1 | 626 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523935.1 | 0 | 27 | 609 | 31 | 631 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 28 | 609 | 5 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1iex_A | 0 | 28 | 609 | 5 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1iew_A | 0 | 28 | 609 | 5 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1iev_A | 0 | 28 | 609 | 5 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1ieq_A | 0 | 28 | 609 | 5 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |