| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra002515 |
| Family | AA1 |
| Protein Properties | Length: 574 Molecular Weight: 63648.3 Isoelectric Point: 9.6283 |
| Chromosome | Chromosome/Scaffold: 10 Start: 9112233 End: 9114509 |
| Description | laccase 17 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 25 | 560 | 0 |
| TRHYTLDIKMHNVTRLCHTKSLVSVNGQFPGPKLIAREGDQLLIKVVNHVPNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNYTIAGQRGTLF YHAHISWLRATVYGPIIILPKRGVPYPFPKPHKEVPMIFGEWFNADPEAIIRQATQTGGGPNVSDAYTINGLPGPLYNCSAKDTFRLRVKPGKTYLLRLI NAALNDELFFSIANHTVTVVEADAIYVKPFETDTILIAPGQTTNLLLKTKPSYPNASFLMTARPYVTGQGTFDNSTVAGVLEYEQPKHAKTSIKNLPLFA PVLPALNDTNFAAKFSNKLRSLNSKRFPANVPLKVDRKFFFTVGLGTTPCNHKNNQTCQGPTNTTMFAASISNISFTMPTKALLQSHYSGQSNGVYSPNF PWNPVVPFNYTGTPPNNTMVRTGTNVMVLRYNTSVELVMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPKKDPKNFNLVDPIERNTVGVPSGGWVAIR FLADNPGVWFMHCHLEVHTSWGLRMAWLVLDGDKPD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 574 Download |
| MAVWLFFAVV LSCLFLLPDP AFGITRHYTL DIKMHNVTRL CHTKSLVSVN GQFPGPKLIA 60 REGDQLLIKV VNHVPNNISI HWHGIRQLRS GWADGPAYIT QCPIQTGQSY VYNYTIAGQR 120 GTLFYHAHIS WLRATVYGPI IILPKRGVPY PFPKPHKEVP MIFGEWFNAD PEAIIRQATQ 180 TGGGPNVSDA YTINGLPGPL YNCSAKDTFR LRVKPGKTYL LRLINAALND ELFFSIANHT 240 VTVVEADAIY VKPFETDTIL IAPGQTTNLL LKTKPSYPNA SFLMTARPYV TGQGTFDNST 300 VAGVLEYEQP KHAKTSIKNL PLFAPVLPAL NDTNFAAKFS NKLRSLNSKR FPANVPLKVD 360 RKFFFTVGLG TTPCNHKNNQ TCQGPTNTTM FAASISNISF TMPTKALLQS HYSGQSNGVY 420 SPNFPWNPVV PFNYTGTPPN NTMVRTGTNV MVLRYNTSVE LVMQDTSILG AESHPLHLHG 480 FNFFVVGQGF GNFDPKKDPK NFNLVDPIER NTVGVPSGGW VAIRFLADNP GVWFMHCHLE 540 VHTSWGLRMA WLVLDGDKPD QKLLPPPVDL PKC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 6.0e-52 | 31 | 147 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 4.0e-62 | 1 | 547 | 577 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 3.0e-73 | 1 | 549 | 579 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 5.0e-88 | 25 | 547 | 558 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 23 | 573 | 552 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI16199.1 | 0 | 13 | 573 | 2 | 566 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_200810.1 | 0 | 1 | 573 | 1 | 577 | LAC17 (laccase 17); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002284473.1 | 0 | 10 | 573 | 16 | 585 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299296.1 | 0 | 1 | 573 | 12 | 581 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329138.1 | 0 | 1 | 573 | 12 | 581 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 26 | 547 | 4 | 517 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1asq_A | 0 | 26 | 547 | 4 | 517 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1asp_B | 0 | 26 | 547 | 4 | 517 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1asp_A | 0 | 26 | 547 | 4 | 517 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1aso_B | 0 | 26 | 547 | 4 | 517 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
