| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra002609 |
| Family | AA1 |
| Protein Properties | Length: 566 Molecular Weight: 62524 Isoelectric Point: 9.3104 |
| Chromosome | Chromosome/Scaffold: 10 Start: 8571505 End: 8574396 |
| Description | laccase 16 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 29 | 552 | 0 |
| IRHYKFNVVMTNTTKLCSSKPIVTVNGQFPGPTIVAREDDTVLIKVVNHVKYNVSIHWHGVRQLRTGWADGPAYITQCPIQPRQNYLYNFTLTGQRGTLW WHAHILWLRATVHGAIVILPKLGVPYPFPKPYKEKTIVLAEWWKSDVEQLINEATKNGTAPNASDAHTINGHSGPISNCPSQSGYGLPVRPGKTYMLRII NAALNEELFFKIAGHKLTVVEVDAVYTKPYKTDTVLIAPGQTTNVLLTANANTGSKYMVAATTFMDAPISFDNVTATATLHYIGHTVSSSKKTVLASLPQ PNATLVASKFIKSLRSLNSREYPAKVPTTVDHSLFFTVGLGANPCPSCNNGFRLVAGINNVTFTMPETALLQAHYFNISHVFTDDFPAKPSNPFNYTAPV DQSVNAATMTGTKLYRLPYNATVQIILQNTAMILSENHPFHLHGFNFFEVGRGLGNFNPEKDPKRFNLVDPVERNTVGVPAGGWTAIRFIADNPGVWFMH CHLEIHTTWGLKMAFVVDNGHGPD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 566 Download |
| MEIPRRFCVC ILTLFVIFLL SPTTVHSIIR HYKFNVVMTN TTKLCSSKPI VTVNGQFPGP 60 TIVAREDDTV LIKVVNHVKY NVSIHWHGVR QLRTGWADGP AYITQCPIQP RQNYLYNFTL 120 TGQRGTLWWH AHILWLRATV HGAIVILPKL GVPYPFPKPY KEKTIVLAEW WKSDVEQLIN 180 EATKNGTAPN ASDAHTINGH SGPISNCPSQ SGYGLPVRPG KTYMLRIINA ALNEELFFKI 240 AGHKLTVVEV DAVYTKPYKT DTVLIAPGQT TNVLLTANAN TGSKYMVAAT TFMDAPISFD 300 NVTATATLHY IGHTVSSSKK TVLASLPQPN ATLVASKFIK SLRSLNSREY PAKVPTTVDH 360 SLFFTVGLGA NPCPSCNNGF RLVAGINNVT FTMPETALLQ AHYFNISHVF TDDFPAKPSN 420 PFNYTAPVDQ SVNAATMTGT KLYRLPYNAT VQIILQNTAM ILSENHPFHL HGFNFFEVGR 480 GLGNFNPEKD PKRFNLVDPV ERNTVGVPAG GWTAIRFIAD NPGVWFMHCH LEIHTTWGLK 540 MAFVVDNGHG PDQSLLPPPA DLPKC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02191 | PLN02191 | 7.0e-69 | 14 | 555 | 577 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 4.0e-89 | 5 | 543 | 564 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 3.0e-99 | 29 | 543 | 546 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 28 | 565 | 542 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABE66261.1 | 0 | 38 | 565 | 1 | 530 | laccase/diphenol oxidase [Arabidopsis thaliana] |
| GenBank | ABK28766.1 | 0 | 38 | 565 | 1 | 530 | unknown [Arabidopsis thaliana] |
| RefSeq | NP_200699.1 | 0 | 38 | 565 | 1 | 523 | LAC16 (laccase 16); laccase [Arabidopsis thaliana] |
| Swiss-Prot | Q1PDH6 | 0 | 1 | 565 | 1 | 566 | LAC16_ARATH RecName: Full=Laccase-16; AltName: Full=Benzenediol:oxygen oxidoreductase 16; AltName: Full=Urishiol oxidase 16; AltName: Full=Diphenol oxidase 16; Flags: Precursor |
| RefSeq | XP_002314124.1 | 0 | 11 | 565 | 7 | 556 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 27 | 544 | 1 | 522 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
| PDB | 1asq_A | 0 | 27 | 544 | 1 | 522 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
| PDB | 1asp_B | 0 | 27 | 544 | 1 | 522 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
