Basic Information | |
---|---|
Species | Brassica rapa |
Cazyme ID | Bra003273 |
Family | GH17 |
Protein Properties | Length: 340 Molecular Weight: 37665.7 Isoelectric Point: 9.3615 |
Chromosome | Chromosome/Scaffold: 07 Start: 12318662 End: 12319775 |
Description | beta-1,3-glucanase 3 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 34 | 338 | 0 |
IGVCYGRIGNNLPRPADAVALYRNRNIRRMRLYDPNQEVLSALRGSNIDLLLDVPNPDLQRIASSQAEADTWVRNNVRNFNGVRFRYISVGNEVQPSDPT SRFVLPAMQNIDRAVSGLGIKVSTAIDTRGISGFPPSSGTFTPEFRNFIAPVITFLVSKQSPLLVNVYPYFSYINNMRDIRLDYALFTSPSTVVNDGSNA YRNLFHALVDTVYAALEKTGGGSVEIVVSESGWPTAGGTATNVDNARTYVNNLIQTVKSGSPRRQGRPIETYIFGMFDENQKSPEFEKFFGMFLPNQQPK YGVNF |
Full Sequence |
---|
Protein Sequence Length: 340 Download |
MSSDQSRFLA SLPLLLLLLS FLMASFFHTA AAQIGVCYGR IGNNLPRPAD AVALYRNRNI 60 RRMRLYDPNQ EVLSALRGSN IDLLLDVPNP DLQRIASSQA EADTWVRNNV RNFNGVRFRY 120 ISVGNEVQPS DPTSRFVLPA MQNIDRAVSG LGIKVSTAID TRGISGFPPS SGTFTPEFRN 180 FIAPVITFLV SKQSPLLVNV YPYFSYINNM RDIRLDYALF TSPSTVVNDG SNAYRNLFHA 240 LVDTVYAALE KTGGGSVEIV VSESGWPTAG GTATNVDNAR TYVNNLIQTV KSGSPRRQGR 300 PIETYIFGMF DENQKSPEFE KFFGMFLPNQ QPKYGVNFD* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.002 | 254 | 326 | 80 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-135 | 34 | 338 | 313 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAA32756.1 | 0 | 63 | 339 | 1 | 278 | beta-1,3-glucanase [Arabidopsis thaliana] |
GenBank | AAL30426.1 | 0 | 11 | 339 | 13 | 343 | AF435089_1 beta-1,3-glucanase [Prunus persica] |
GenBank | ABC94638.2 | 0 | 1 | 339 | 3 | 341 | basic glucanase [Brassica juncea] |
EMBL | CAB68130.1 | 0 | 63 | 339 | 1 | 278 | beta-1, 3-glucanase [Arabidopsis thaliana] |
RefSeq | NP_191283.2 | 0 | 29 | 339 | 30 | 341 | BG3 (BETA-1,3-GLUCANASE 3); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 33 | 338 | 1 | 315 | A Chain A, Choline Binding Domain Of The Major Autolysin (C-Lyta) From Streptococcus Pneumoniae |
PDB | 3f55_C | 0 | 33 | 338 | 1 | 315 | A Chain A, Choline Binding Domain Of The Major Autolysin (C-Lyta) From Streptococcus Pneumoniae |
PDB | 3f55_B | 0 | 33 | 338 | 1 | 315 | A Chain A, Choline Binding Domain Of The Major Autolysin (C-Lyta) From Streptococcus Pneumoniae |
PDB | 3f55_A | 0 | 33 | 338 | 1 | 315 | A Chain A, Choline Binding Domain Of The Major Autolysin (C-Lyta) From Streptococcus Pneumoniae |
PDB | 3em5_D | 0 | 33 | 338 | 1 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |