| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra003508 |
| Family | GH3 |
| Protein Properties | Length: 647 Molecular Weight: 70360 Isoelectric Point: 8.0104 |
| Chromosome | Chromosome/Scaffold: 07 Start: 13521432 End: 13524204 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 120 | 348 | 0 |
| STRLGIPLLYAIDAVHGHNTFINATIFPHNVGLGATRDPDLVKKIGAITALEVRATGIAQAFAPCVAVCRDPRWGRCYESYSEDPKVVTMMTESIMEGLQ GNAPYVADFKTKLAGCAKHFVGDGGTVGGINENNTVADNATLFGIHMPPFEIAVKKGIASIMASYSSLNGVKMHANRAMITDYLKNTLKFQGFVISDWLG IDRITTPPRANYTYSIEASINAGIDMVMV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 647 Download |
| MAATIYGVRS FFLLAAIVIL LSGRSGGATA ATRGYIKYKD PKAAVEERVE DLLTRMTLPE 60 KLGQMCQVDR FNFSFYPPAT RHEIFTKYLI GSVLSNPYDT GANPSKRVVE ANTMQKLSLS 120 TRLGIPLLYA IDAVHGHNTF INATIFPHNV GLGATRDPDL VKKIGAITAL EVRATGIAQA 180 FAPCVAVCRD PRWGRCYESY SEDPKVVTMM TESIMEGLQG NAPYVADFKT KLAGCAKHFV 240 GDGGTVGGIN ENNTVADNAT LFGIHMPPFE IAVKKGIASI MASYSSLNGV KMHANRAMIT 300 DYLKNTLKFQ GFVISDWLGI DRITTPPRAN YTYSIEASIN AGIDMVMVPF QYIEFLEGLT 360 KLVNGGYIPM SRIDDAVRRV LRVKFSIGLF ENPLAEETLV AEFGSEAHRE VAREAVRKSM 420 VLLKNGKTNV DKVIPLQRNV KKIVVAGAHA NNMGWQCGGF TLTWQGFNGT GENIGRNKAM 480 QLPTGKTRGT TILEAIMKTV DHTTEVVYVE EPNQDTSKLH ADAAYTIVVV GEAPYAETQG 540 DSTTLSIAAP GPDTIRHTCG SGMKCIVVLV TGRPLVIESY LDTIDALVVA WLPGTEGQGI 600 TDVLFGDHPF TGTLPRTWMK SVTQLPMNVG DKNYDPLFPF GYGIKT* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 1.0e-35 | 122 | 644 | 591 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 1.0e-42 | 420 | 644 | 241 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 2.0e-87 | 49 | 644 | 656 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 2.0e-91 | 56 | 463 | 418 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 8.0e-97 | 57 | 383 | 330 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF79936.1 | 0 | 35 | 646 | 24 | 618 | exoglucanase precursor [Zea mays] |
| GenBank | ABK95015.1 | 0 | 11 | 646 | 6 | 620 | unknown [Populus trichocarpa] |
| RefSeq | NP_001051275.1 | 0 | 28 | 646 | 17 | 620 | Os03g0749300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130296.1 | 0 | 35 | 646 | 24 | 618 | exoglucanase1 [Zea mays] |
| RefSeq | NP_191830.1 | 0 | 1 | 646 | 1 | 650 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1x39_A | 0 | 35 | 646 | 2 | 599 | A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or62 |
| PDB | 1x38_A | 0 | 35 | 646 | 2 | 599 | A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or62 |
| PDB | 1lq2_A | 0 | 35 | 646 | 2 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1j8v_A | 0 | 35 | 646 | 2 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1iex_A | 0 | 35 | 646 | 2 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
