| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra003845 |
| Family | GT4 |
| Protein Properties | Length: 941 Molecular Weight: 106393 Isoelectric Point: 7.3133 |
| Chromosome | Chromosome/Scaffold: 07 Start: 15334633 End: 15338286 |
| Description | sucrose synthase 6 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 574 | 738 | 2.8026e-45 |
| EREKPIIFSMARLDTVKNITGLVEWYGKDKRLREMANLVVVAGFFDMSKSNDREEKAEIKKMHDLIEKYNLKGKFRWIAAQTDRYRNSELYRCIADTKGV FVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPNNGDESVARIGDFFSKCS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 941 Download |
| MASSSSPTTL QRSDSIADKM PDALKQSRYH MKRCFASFVK GGKKLMKREN LMNEIEKCIE 60 DSNDRKKIME GLFGYILTCT QEAAVVPPFV ALAARPDPGF WEYVKVNAGD LSVDEITATD 120 YLKLKESVFD ESWAKDENAL ELDFGAIDFT TPRLNLSSSI GNGADYISKF ISSKLGGNTD 180 KLEPLLNYLL RLNHHGENLM INEGINTVAK LKKSLMLAVN VVSTYPKHTP YETFSPRLKE 240 MGFEKGWGNT SERVRETMVM LSEVLEAPDS VKLDLLFSRL PTVFNVVIFS VHGYFGQQDV 300 LGLPDTGGQV VYILDQVRAL EEELLIRINQ QGLGFKPQIL VVTRLIPEAR GTKCDQELEA 360 IEGTKHSHIL RVPFVTDKGT LRQWVSRFDI YPYLERFTQD ATSKILQRFE CKPDLIIGNY 420 TDGNLVASLM ATKLGVTQGT IAHALEKTKY EDSDAKWTEL DPKYHFSCQF TADLIAMNVT 480 DFIITSTYQE IAGSKERPGQ YESHTAFTMP GLCRVVSGID VFDPKFNIAA PGADQSVYFP 540 YTEKQKRLTK FHPSIQELLY NEKDNNEHMG YLAEREKPII FSMARLDTVK NITGLVEWYG 600 KDKRLREMAN LVVVAGFFDM SKSNDREEKA EIKKMHDLIE KYNLKGKFRW IAAQTDRYRN 660 SELYRCIADT KGVFVQPALY EAFGLTVIEA MNCGLPTFAT NQGGPAEIIV DGVSGFHIDP 720 NNGDESVARI GDFFSKCSTD GLYWDTISKA GLKRIYECYT WKIYAEKLLK MGSIYGFWRQ 780 VNEDQKKAKQ RYIDMLYNLQ FKPLIKKVTI PEDKSLPMRL ASLRNLLPKK PASLGGGSKQ 840 KEVTETKPKS KEGQERDDVK AGEGEVKEGL LAAEASERIK KVVETSEETQ RLEKMKIAYG 900 QQRNQGGSSV RNLFLSVVVC LYICYILKQR FFGTYSVQED * 960 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02472 | sucr_P_syn_N | 2.0e-67 | 286 | 771 | 495 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
| cd03800 | GT1_Sucrose_synthase | 3.0e-122 | 285 | 769 | 485 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
| PLN00142 | PLN00142 | 0 | 4 | 817 | 814 | + sucrose synthase | ||
| TIGR02470 | sucr_synth | 0 | 28 | 808 | 782 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| pfam00862 | Sucrose_synth | 0 | 12 | 561 | 550 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005985 | sucrose metabolic process |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI35298.1 | 0 | 1 | 870 | 1 | 868 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_177480.1 | 0 | 3 | 939 | 2 | 941 | SUS6 (SUCROSE SYNTHASE 6); UDP-glycosyltransferase/ sucrose synthase [Arabidopsis thaliana] |
| RefSeq | XP_002270861.1 | 0 | 1 | 856 | 1 | 856 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002329693.1 | 0 | 5 | 804 | 2 | 801 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002526290.1 | 0 | 5 | 860 | 2 | 857 | sucrose synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s29_H | 0 | 4 | 813 | 2 | 807 | A Chain A, Crystal Structure Of A Protease-Resistant Mutant Form Of Human Galectin-8 |
| PDB | 3s29_G | 0 | 4 | 813 | 2 | 807 | A Chain A, Crystal Structure Of A Protease-Resistant Mutant Form Of Human Galectin-8 |
| PDB | 3s29_F | 0 | 4 | 813 | 2 | 807 | A Chain A, Crystal Structure Of A Protease-Resistant Mutant Form Of Human Galectin-8 |
| PDB | 3s29_E | 0 | 4 | 813 | 2 | 807 | A Chain A, Crystal Structure Of A Protease-Resistant Mutant Form Of Human Galectin-8 |
| PDB | 3s29_D | 0 | 4 | 813 | 2 | 807 | A Chain A, Crystal Structure Of A Protease-Resistant Mutant Form Of Human Galectin-8 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794519 | 802 | 10 | 810 | 0 |
| BU103683 | 810 | 1 | 810 | 0 |
| FG227316 | 455 | 283 | 736 | 0 |
| CX109054 | 600 | 107 | 706 | 0 |
| GW837855 | 432 | 331 | 761 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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