| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra003861 |
| Family | GH35 |
| Protein Properties | Length: 683 Molecular Weight: 76818.2 Isoelectric Point: 8.6596 |
| Chromosome | Chromosome/Scaffold: 07 Start: 15417271 End: 15421409 |
| Description | beta-galactosidase 17 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 66 | 379 | 0 |
| FWKDENTFQIIGGDLHYFRVLPEYWEDRLMRAKALGLNTIQTYVPWNLHEPKPGKFVFEGIADLVSFIKLCQKLDLLVMLRAGPYICGEWDLGGFPAWLL AVKPPLRLRTADPAYLKLVFPLLYSNGGPVIMVQIENEYGSYGNDKAYLRNLVTMARGHLGNDIILYTTDGGTRETLEKGNVPLYNVYSAVDFSTGDDPW PIFELQKKFNAPGRSPPLSSEFYTGWLTHWGEKIAKTDAEFTAASLEKILSRNGSAVLYMVHGGTNFGFYNGANTGSDQFDYKPDLTSYDYDAPIKESGD IDNPKFKALQRVIK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 683 Download |
| MAKISRPSTG RHRLAFVLLL FLVAVGICVP VFALLPSLSS HQYLPPALSR DEKMMSRRFY 60 IKDDKFWKDE NTFQIIGGDL HYFRVLPEYW EDRLMRAKAL GLNTIQTYVP WNLHEPKPGK 120 FVFEGIADLV SFIKLCQKLD LLVMLRAGPY ICGEWDLGGF PAWLLAVKPP LRLRTADPAY 180 LKLVFPLLYS NGGPVIMVQI ENEYGSYGND KAYLRNLVTM ARGHLGNDII LYTTDGGTRE 240 TLEKGNVPLY NVYSAVDFST GDDPWPIFEL QKKFNAPGRS PPLSSEFYTG WLTHWGEKIA 300 KTDAEFTAAS LEKILSRNGS AVLYMVHGGT NFGFYNGANT GSDQFDYKPD LTSYDYDAPI 360 KESGDIDNPK FKALQRVIKK YSAPPHSNVP SSNKRKAYGS IKMQRTISLF DLMSMTDPVD 420 VITSTNPISM ESAGQMFGFL VYESSYISKK SGNILRIPKV HDRGQVFVSC LSQDVDGGVL 480 RYIGTTERWN NQPVSIPTTE CASNTSLFIL VENMGRVNYG PYIFDEKGIL STVYLDGQIL 540 HGWKMIPIPF HNLNQMPNFS FEIQRTKKRS KKFELIKDVG QKEPALFAGE FSISSVKESK 600 DTYLSFNGWG KGVAFINKFN IGRYWPSVGP QCNLYVPAPL LKPGRNSVVI FELESPHVDL 660 LLRSVDQEDF TCGSNDSKVN QL* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 3.0e-8 | 79 | 205 | 150 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 2.0e-34 | 54 | 654 | 657 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN03059 | PLN03059 | 1.0e-46 | 75 | 379 | 333 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 4.0e-152 | 66 | 381 | 327 | + Glycosyl hydrolases family 35. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI35958.1 | 0 | 53 | 679 | 69 | 707 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001031273.1 | 0 | 84 | 682 | 26 | 635 | BGAL17 (beta-galactosidase 17); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | NP_565051.1 | 0 | 1 | 682 | 1 | 697 | BGAL17 (beta-galactosidase 17); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002280228.1 | 0 | 53 | 679 | 45 | 683 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002327549.1 | 0 | 57 | 682 | 1 | 643 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 0 | 64 | 654 | 16 | 599 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3thd_C | 0 | 64 | 654 | 16 | 599 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3thd_B | 0 | 64 | 654 | 16 | 599 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3thd_A | 0 | 64 | 654 | 16 | 599 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3thc_D | 0 | 64 | 654 | 16 | 599 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
