| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra003946 |
| Family | GH9 |
| Protein Properties | Length: 489 Molecular Weight: 54172.7 Isoelectric Point: 9.6867 |
| Chromosome | Chromosome/Scaffold: 07 Start: 15914863 End: 15918647 |
| Description | glycosyl hydrolase 9B1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 24 | 478 | 0 |
| DYRDALRKSIMFFEGQRSGKLPPDQRLRWRRDSALRDGSSAGVDLSGGYYDAGDNVKFGFPMAFTTTMLSWSIIDFGRTMGPELKNAVKAVKWGTDYLLK ATAIPGVVFVQVGDAYSDHNCWERPEDMDTLRTVYKIDRAHPGSDVAGETAAALAASSIVFRRRDPAYSRRLLDRATRVFAFANRYRGAYSNSLYHAVCP FYCDFNGYQDELLWGAAWLHKASRKRAYREFIVKNEVVLRAGDTINEFGWDNKHAGINVLISKEVLMGKAEYFESFKQNADGFICSILPGVSHPQVQYSR GGLLVKTGGSNMQHVTSLSFLLLAYSNYLSHAKKVVPCGELTASPSLLRQVAKRQVDYILGDNPLGMSYMVGYGRRFPRRIHHRGSSVPSVSAHPARIGC KEGSRYFLSPNPNPNLLVGAVVGGPNVTDAFPDSRPYFVQSEPTTYINAPLVGLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 489 Download |
| MAPSLSLVLL IVLLSSPAIY AGHDYRDALR KSIMFFEGQR SGKLPPDQRL RWRRDSALRD 60 GSSAGVDLSG GYYDAGDNVK FGFPMAFTTT MLSWSIIDFG RTMGPELKNA VKAVKWGTDY 120 LLKATAIPGV VFVQVGDAYS DHNCWERPED MDTLRTVYKI DRAHPGSDVA GETAAALAAS 180 SIVFRRRDPA YSRRLLDRAT RVFAFANRYR GAYSNSLYHA VCPFYCDFNG YQDELLWGAA 240 WLHKASRKRA YREFIVKNEV VLRAGDTINE FGWDNKHAGI NVLISKEVLM GKAEYFESFK 300 QNADGFICSI LPGVSHPQVQ YSRGGLLVKT GGSNMQHVTS LSFLLLAYSN YLSHAKKVVP 360 CGELTASPSL LRQVAKRQVD YILGDNPLGM SYMVGYGRRF PRRIHHRGSS VPSVSAHPAR 420 IGCKEGSRYF LSPNPNPNLL VGAVVGGPNV TDAFPDSRPY FVQSEPTTYI NAPLVGLLGY 480 FSTHSSWR* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02308 | PLN02308 | 0 | 20 | 488 | 469 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 20 | 486 | 467 | + endoglucanase | ||
| PLN03009 | PLN03009 | 0 | 21 | 486 | 469 | + cellulase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 24 | 479 | 462 | + Glycosyl hydrolase family 9. | ||
| PLN02613 | PLN02613 | 0 | 24 | 476 | 457 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA67156.1 | 0 | 23 | 488 | 27 | 493 | endo-1,4-beta-glucanase [Arabidopsis thaliana] |
| EMBL | CAA67157.1 | 0 | 7 | 488 | 10 | 492 | endo-1,4-beta-glucanase [Arabidopsis thaliana] |
| RefSeq | NP_173735.1 | 0 | 1 | 484 | 7 | 488 | AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_177228.1 | 0 | 23 | 488 | 27 | 492 | ATGH9B1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | XP_002527779.1 | 0 | 4 | 485 | 11 | 492 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 23 | 478 | 3 | 425 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1ksc_A | 0 | 23 | 478 | 3 | 425 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1ks8_A | 0 | 23 | 478 | 3 | 425 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 24 | 472 | 5 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 24 | 472 | 5 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
