| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra004833 |
| Family | GH1 |
| Protein Properties | Length: 541 Molecular Weight: 62303.3 Isoelectric Point: 6.8632 |
| Chromosome | Chromosome/Scaffold: 05 Start: 2013630 End: 2016348 |
| Description | beta glucosidase 27 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 17 | 492 | 0 |
| SNFPEGFLFGTASSAYQYEGAVNDASRGLSVWDTFVRKHPERNCYSHADQAVEFYHHYKEDIQRMKDINMDSFRFSISWPRLFPHGKKSKGVNKEGIKFY NDLIDELLANGITPLATLFHWDTPQALEDEYNGFLSEKAVDDFRDFATICFEEFGDRVKYWVTLNEPWVYSIGGYDTGRKAPGRASNYMNEAALAGESGL EVYTVSHNLLLAHAEAVEVFRNNPKCKDGKIGIAHCPVWFEPYDSNCPDDHEAVERAMEFMFGWHMDPTVYGDYPQVMKRSIGKRLPSFTAAQSQKLKGS FDFVGVNYYSAFYVKNVTDVDHNTPNWRSDACIEWKKQNKAGEILGPRGVSEWDFLYPQGLRKFLNHAKNKYGSPKFMITENGHCDIDYEKKAKLSNLMD LQRTEYHEKHLQSIHQAIKEDGVQVEGYYAWSLLDNCEWNAGYGVRYGLFYVDYNNGLKRYPKMSAMWFKEFLKKE | |||
| Full Sequence |
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| Protein Sequence Length: 541 Download |
| MMPGKKIYAA KNSFGRSNFP EGFLFGTASS AYQYEGAVND ASRGLSVWDT FVRKHPERNC 60 YSHADQAVEF YHHYKEDIQR MKDINMDSFR FSISWPRLFP HGKKSKGVNK EGIKFYNDLI 120 DELLANGITP LATLFHWDTP QALEDEYNGF LSEKAVDDFR DFATICFEEF GDRVKYWVTL 180 NEPWVYSIGG YDTGRKAPGR ASNYMNEAAL AGESGLEVYT VSHNLLLAHA EAVEVFRNNP 240 KCKDGKIGIA HCPVWFEPYD SNCPDDHEAV ERAMEFMFGW HMDPTVYGDY PQVMKRSIGK 300 RLPSFTAAQS QKLKGSFDFV GVNYYSAFYV KNVTDVDHNT PNWRSDACIE WKKQNKAGEI 360 LGPRGVSEWD FLYPQGLRKF LNHAKNKYGS PKFMITENGH CDIDYEKKAK LSNLMDLQRT 420 EYHEKHLQSI HQAIKEDGVQ VEGYYAWSLL DNCEWNAGYG VRYGLFYVDY NNGLKRYPKM 480 SAMWFKEFLK KEEIEDSEKE GLMLNSLVNK KRKRFLTSSG LPSCYIPKMS ESSKALELFF 540 * |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02849 | PLN02849 | 5.0e-120 | 14 | 492 | 489 | + beta-glucosidase |
| PLN02814 | PLN02814 | 1.0e-123 | 12 | 490 | 484 | + beta-glucosidase |
| TIGR03356 | BGL | 2.0e-137 | 20 | 485 | 469 | + beta-galactosidase. |
| COG2723 | BglB | 3.0e-139 | 16 | 499 | 490 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] |
| pfam00232 | Glyco_hydro_1 | 2.0e-165 | 18 | 491 | 477 | + Glycosyl hydrolase family 1. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG23719.1 | 0 | 16 | 537 | 28 | 551 | beta-glucosidase [Arabidopsis thaliana] |
| EMBL | CAB75927.1 | 0 | 7 | 540 | 1 | 534 | beta-glucosidase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_181977.1 | 0 | 5 | 497 | 5 | 500 | PEN2 (PENETRATION 2); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase [Arabidopsis thaliana] |
| RefSeq | NP_191571.4 | 0 | 1 | 540 | 1 | 540 | BGLU27 (BETA GLUCOSIDASE 27); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_191573.1 | 0 | 16 | 537 | 28 | 551 | DIN2 (DARK INDUCIBLE 2); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ptq_B | 0 | 9 | 491 | 24 | 505 | B Chain B, Antibody Structure |
| PDB | 3ptq_A | 0 | 9 | 491 | 24 | 505 | B Chain B, Antibody Structure |
| PDB | 3ptm_B | 0 | 9 | 491 | 24 | 505 | B Chain B, Antibody Structure |
| PDB | 3ptm_A | 0 | 9 | 491 | 24 | 505 | B Chain B, Antibody Structure |
| PDB | 3ptk_B | 0 | 9 | 491 | 24 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| glucosinolate biosynthesis from tryptophan | RXN-1444 | - | indol-3-ylmethylglucosinolate glucohydrolase |
| indole glucosinolate breakdown (active in intact plant cell) | RXN-1444 | - | indol-3-ylmethylglucosinolate glucohydrolase |
| indole glucosinolate breakdown (active in intact plant cell) | RXNQT-4359 | - | 4-methoxy-3-indolylmethylglucosinolate glucohydrolase |
| indole glucosinolate breakdown (insect chewing induced) | RXN-1444 | - | indol-3-ylmethylglucosinolate glucohydrolase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV643299 | 241 | 225 | 465 | 0 |
| HO794849 | 471 | 12 | 480 | 0 |
| FG227815 | 479 | 16 | 490 | 0 |
| EE466996 | 222 | 260 | 481 | 0 |
| HO779715 | 450 | 33 | 480 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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