| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra004837 |
| Family | GH1 |
| Protein Properties | Length: 1168 Molecular Weight: 135585 Isoelectric Point: 5.7894 |
| Chromosome | Chromosome/Scaffold: 05 Start: 2042204 End: 2066541 |
| Description | beta glucosidase 28 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 31 | 507 | 0 |
| RRSFPHNFVFGTAASAFQYEGATSVGGKSPSIWDYFSHTFPERTNMQNGDVAVDFYHRYKDDIKLMKELNMDAFRFSISWARLIPSGKVKDGVNKEGVQF YNALIDELIANGIQPSMSLYHWDHPQVLEDEYGGFLSPQIIEDFRDFSRVCFEEFGDRVKMWTTINEPYIITVAGYDTGNKAVGRCSKWVNSQCKAGDSA TEPYIASHHLLLAHAAAVHEFRKCNKTSQDGQIGIVLSPLWFEPYDSTSLEDNEAVKRALAIELDWHLDPVIHGDYPETLKKQVGKRLPSFTAEQSRMLK NSSDFVGVNYYTARYIAHLPHVDPARPRFKTDQQLEWRVTNHSNHQIGPEEDRGILHSVPEGLRKVLNYIKDKYNNPTVYIKENGINDYEDGTKSREDIL KDTFRIKYHEDHLEQLHKAIMEDGCDVRGYYAWSLLDNFEWEHGYSTRFGLYYVDYDNNLERYPKDSVNWFKEFLSR | |||
| GH1 | 619 | 1090 | 0 |
| RSDFPDDFIFGTATSAFQTEGATSEERTNMQNADVAVDFYHRYKLDKELYLILWIQDDIKLLKELNMDSFRFSISWARLIPSGKVEDGVNKEGLQFYNAL IDELLAHGIRPSVTLYHWDHPQALEDEYGGFLSPQIIEDFRNFARVCFENFGDKVKLWTTINEPSVISIAGYDTGNKAVGRCSKWVNNKCQAGDSATEPY IVSHHLLLSHAAAVQEFRKCNKTSKDGKIGIVISPPWLEPYDFTSSADKHAVERGLTVEIDWHLDPVVYGDYPKIMKKHAGSRLPSFTAEQSKMLRNSYD FIGINYYTARFVAHRPHIDPALRRFRTDHQFERKEKNHSNHLIGPGENRGVLYYSYPEGFRRLLNYVKDKYNNPIVYIKENGINDYDDGTKSRDEILNDT FRISYHTDHLQQLHKAIIDDGCDVRGYYTWSLLDNFEWEHGYSTRFGLYYIDRENDLKRYPKDSVHWFKQFL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1168 Download |
| MKVHFFILLL IVSWLSKKIT SLPPESRVLG RRSFPHNFVF GTAASAFQYE GATSVGGKSP 60 SIWDYFSHTF PERTNMQNGD VAVDFYHRYK DDIKLMKELN MDAFRFSISW ARLIPSGKVK 120 DGVNKEGVQF YNALIDELIA NGIQPSMSLY HWDHPQVLED EYGGFLSPQI IEDFRDFSRV 180 CFEEFGDRVK MWTTINEPYI ITVAGYDTGN KAVGRCSKWV NSQCKAGDSA TEPYIASHHL 240 LLAHAAAVHE FRKCNKTSQD GQIGIVLSPL WFEPYDSTSL EDNEAVKRAL AIELDWHLDP 300 VIHGDYPETL KKQVGKRLPS FTAEQSRMLK NSSDFVGVNY YTARYIAHLP HVDPARPRFK 360 TDQQLEWRVT NHSNHQIGPE EDRGILHSVP EGLRKVLNYI KDKYNNPTVY IKENGINDYE 420 DGTKSREDIL KDTFRIKYHE DHLEQLHKAI MEDGCDVRGY YAWSLLDNFE WEHGYSTRFG 480 LYYVDYDNNL ERYPKDSVNW FKEFLSRVGI KSGQEREEEQ VWYVSRERSS QEKNNKTLDD 540 PEGFEASVGT IMYLMTNTSR RKEEERDRCT FDIPYTRYVN PIIFLSYVNE SHNYCFKYST 600 TWFTKNVISP SPESRLLDRS DFPDDFIFGT ATSAFQTEGA TSEERTNMQN ADVAVDFYHR 660 YKLDKELYLI LWIQDDIKLL KELNMDSFRF SISWARLIPS GKVEDGVNKE GLQFYNALID 720 ELLAHGIRPS VTLYHWDHPQ ALEDEYGGFL SPQIIEDFRN FARVCFENFG DKVKLWTTIN 780 EPSVISIAGY DTGNKAVGRC SKWVNNKCQA GDSATEPYIV SHHLLLSHAA AVQEFRKCNK 840 TSKDGKIGIV ISPPWLEPYD FTSSADKHAV ERGLTVEIDW HLDPVVYGDY PKIMKKHAGS 900 RLPSFTAEQS KMLRNSYDFI GINYYTARFV AHRPHIDPAL RRFRTDHQFE RKEKNHSNHL 960 IGPGENRGVL YYSYPEGFRR LLNYVKDKYN NPIVYIKENG INDYDDGTKS RDEILNDTFR 1020 ISYHTDHLQQ LHKAIIDDGC DVRGYYTWSL LDNFEWEHGY STRFGLYYID RENDLKRYPK 1080 DSVHWFKQFL NIPVLKGEQT ENEEGWKEEN NNKTLDDSEG FETSIDSIIN LMTNTSRIEE 1140 EGKDICAFEN PNDQLGFLLG PQSYLEL* 1200 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03356 | BGL | 3.0e-126 | 623 | 1086 | 480 | + beta-galactosidase. | ||
| COG2723 | BglB | 2.0e-131 | 34 | 503 | 476 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| TIGR03356 | BGL | 9.0e-132 | 35 | 501 | 476 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 7.0e-151 | 622 | 1091 | 488 | + Glycosyl hydrolase family 1. | ||
| pfam00232 | Glyco_hydro_1 | 2.0e-159 | 33 | 510 | 481 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC16092.1 | 0 | 1 | 571 | 1 | 553 | putative beta-glucosidase [Arabidopsis thaliana] |
| GenBank | AAC16092.1 | 0 | 592 | 1159 | 4 | 564 | putative beta-glucosidase [Arabidopsis thaliana] |
| RefSeq | NP_001118524.1 | 0 | 1 | 571 | 1 | 571 | BGLU29 (BETA GLUCOSIDASE 29); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_850416.1 | 0 | 1 | 571 | 1 | 558 | BGLU28 (BETA GLUCOSIDASE 28); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_850416.1 | 0 | 592 | 1159 | 4 | 569 | BGLU28 (BETA GLUCOSIDASE 28); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gnr_A | 0 | 29 | 505 | 12 | 486 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
| PDB | 3gnr_A | 0 | 617 | 1090 | 12 | 486 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
| PDB | 3gnp_A | 0 | 29 | 505 | 12 | 486 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
| PDB | 3gnp_A | 0 | 617 | 1090 | 12 | 486 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
| PDB | 3gno_A | 0 | 29 | 505 | 12 | 486 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
