y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra004839 |
Family | GH1 |
Protein Properties | Length: 402 Molecular Weight: 45663.1 Isoelectric Point: 6.0544 |
Chromosome | Chromosome/Scaffold: 05 Start: 2080458 End: 2083229 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 2 | 339 | 0 |
TQDDFRDYASLCFERFGDRVSLWCTLNEPWVYSVAGYDTGRKAPGRCSKYVNGASVAGMSGYEAYIVSHNMLLAHAEAVQVFRKCDHIKNGQIGIAHNPL WYEPYDPSDPDDVEGCNRAMDFMIGWHHHPTAYGDYPDTMKKSVGDRLPSFTPEQSKKLIGSCDYVGINYYSSLFVKSIKHVDPTQPTWRTDQGVDWMKT NIDGKQIAKQGGSEWSFTYPTGLRNVLKYMKKNYDNPRILITENGYGEVADQSQSLFMYNPSIDTERLEYIEGHIHAIHQAIHEDGVRVEGYYVWSLLDN FEWNSGYGVRYGLYYIDYKDGLRRYPKMSALWLKEFLK |
Full Sequence |
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Protein Sequence Length: 402 Download |
MTQDDFRDYA SLCFERFGDR VSLWCTLNEP WVYSVAGYDT GRKAPGRCSK YVNGASVAGM 60 SGYEAYIVSH NMLLAHAEAV QVFRKCDHIK NGQIGIAHNP LWYEPYDPSD PDDVEGCNRA 120 MDFMIGWHHH PTAYGDYPDT MKKSVGDRLP SFTPEQSKKL IGSCDYVGIN YYSSLFVKSI 180 KHVDPTQPTW RTDQGVDWMK TNIDGKQIAK QGGSEWSFTY PTGLRNVLKY MKKNYDNPRI 240 LITENGYGEV ADQSQSLFMY NPSIDTERLE YIEGHIHAIH QAIHEDGVRV EGYYVWSLLD 300 NFEWNSGYGV RYGLYYIDYK DGLRRYPKMS ALWLKEFLKF DQEDESSSSS AESKKEEKKE 360 SYGKQLLHSV QDSGALPAVL GSLFVVTATV GTSLFFKGSN N* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2723 | BglB | 3.0e-63 | 4 | 336 | 337 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
PLN02814 | PLN02814 | 6.0e-68 | 4 | 339 | 343 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 2.0e-69 | 5 | 339 | 340 | + beta-glucosidase | ||
TIGR03356 | BGL | 2.0e-77 | 2 | 333 | 340 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 3.0e-99 | 2 | 339 | 345 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB75927.1 | 0 | 4 | 339 | 151 | 484 | beta-glucosidase-like protein [Arabidopsis thaliana] |
RefSeq | NP_181977.1 | 0 | 4 | 401 | 158 | 560 | PEN2 (PENETRATION 2); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase [Arabidopsis thaliana] |
RefSeq | NP_191571.4 | 0 | 4 | 339 | 157 | 490 | BGLU27 (BETA GLUCOSIDASE 27); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_191573.1 | 0 | 4 | 383 | 169 | 543 | DIN2 (DARK INDUCIBLE 2); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_197843.2 | 0 | 4 | 339 | 175 | 510 | BGLU32 (BETA GLUCOSIDASE 32); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 4 | 338 | 173 | 503 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3ptq_A | 0 | 4 | 338 | 173 | 503 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3ptm_B | 0 | 4 | 338 | 173 | 503 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3ptm_A | 0 | 4 | 338 | 173 | 503 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3ptk_B | 0 | 4 | 338 | 173 | 503 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
glucosinolate biosynthesis from tryptophan | RXN-1444 | - | indol-3-ylmethylglucosinolate glucohydrolase |
indole glucosinolate breakdown (active in intact plant cell) | RXN-1444 | - | indol-3-ylmethylglucosinolate glucohydrolase |
indole glucosinolate breakdown (active in intact plant cell) | RXNQT-4359 | - | 4-methoxy-3-indolylmethylglucosinolate glucohydrolase |
indole glucosinolate breakdown (insect chewing induced) | RXN-1444 | - | indol-3-ylmethylglucosinolate glucohydrolase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |