| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra004844 |
| Family | GH9 |
| Protein Properties | Length: 490 Molecular Weight: 53841.4 Isoelectric Point: 5.6962 |
| Chromosome | Chromosome/Scaffold: 05 Start: 2107659 End: 2109389 |
| Description | glycosyl hydrolase 9B9 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 31 | 486 | 0 |
| NYGEALTKSLLYFEAQRSGKLPPNQRVNWRGDSALRDGSDAHVDLTGGYYDAGDNMKFGFPMAFTTTMLAWSSVEWESELKAHKEHRNVLDAIKWATDYF IKAHPEPNVLYGQVGDGKSDHACWMRPEDMTTPRPSYRIDAQHPGADLAGETAAAMAAASLAFRKYDEAYAEELIGHAKDLFEFAKAYPGVYHSSITDAG AFYPSSGYQDELFWAAAWLHRATKSQTYLDYLTDVYGTGGQRTVFAWDDKFVGAQVLIAKLALEREGMFNDKLEDYKNMAEYFICNCVQMGSNNVKVTPG GLLWFLPWNNFQYTPTASFVLAAYSKYLNATKKPIDCPSGTFEAADLLHHARVQADYILGSNPKSMSYMVGFGTNYPKSPHHRGASIVSIKNSSTPVTCT GGFNDWYNNPAPNPNELTGALVGGPNEIDGYGDERTDIQHGEPGLSTVGPFVGVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 490 Download |
| MSQLRSGSSQ CLWTSTLLIV LLSMPMTHGT NYGEALTKSL LYFEAQRSGK LPPNQRVNWR 60 GDSALRDGSD AHVDLTGGYY DAGDNMKFGF PMAFTTTMLA WSSVEWESEL KAHKEHRNVL 120 DAIKWATDYF IKAHPEPNVL YGQVGDGKSD HACWMRPEDM TTPRPSYRID AQHPGADLAG 180 ETAAAMAAAS LAFRKYDEAY AEELIGHAKD LFEFAKAYPG VYHSSITDAG AFYPSSGYQD 240 ELFWAAAWLH RATKSQTYLD YLTDVYGTGG QRTVFAWDDK FVGAQVLIAK LALEREGMFN 300 DKLEDYKNMA EYFICNCVQM GSNNVKVTPG GLLWFLPWNN FQYTPTASFV LAAYSKYLNA 360 TKKPIDCPSG TFEAADLLHH ARVQADYILG SNPKSMSYMV GFGTNYPKSP HHRGASIVSI 420 KNSSTPVTCT GGFNDWYNNP APNPNELTGA LVGGPNEIDG YGDERTDIQH GEPGLSTVGP 480 FVGVLAAVA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02613 | PLN02613 | 5.0e-166 | 31 | 487 | 461 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 4 | 489 | 489 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 31 | 486 | 462 | + Glycosyl hydrolase family 9. | ||
| PLN02171 | PLN02171 | 0 | 29 | 489 | 467 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 17 | 486 | 476 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_181982.1 | 0 | 1 | 488 | 1 | 490 | AtGH9B9 (Arabidopsis thaliana glycosyl hydrolase 9B9); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_181983.1 | 0 | 1 | 488 | 1 | 489 | AtGH9B10 (Arabidopsis thaliana glycosyl hydrolase 9B10); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_181984.1 | 0 | 1 | 489 | 1 | 491 | AtGH9B11 (Arabidopsis thaliana glycosyl hydrolase 9B11); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_181985.1 | 0 | 8 | 489 | 5 | 492 | AtGH9B12 (Arabidopsis thaliana glycosyl hydrolase 9B12); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002269618.1 | 0 | 30 | 489 | 23 | 481 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 31 | 488 | 4 | 428 | A Chain A, Crystal Structure Of Natural Cinnamomin (Isoform Iii) |
| PDB | 1ksc_A | 0 | 31 | 488 | 4 | 428 | A Chain A, Crystal Structure Of Natural Cinnamomin (Isoform Iii) |
| PDB | 1ks8_A | 0 | 31 | 488 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 25 | 488 | 19 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 31 | 488 | 5 | 440 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
