| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra004845 |
| Family | GH9 |
| Protein Properties | Length: 490 Molecular Weight: 53372.8 Isoelectric Point: 5.2158 |
| Chromosome | Chromosome/Scaffold: 05 Start: 2111987 End: 2113709 |
| Description | glycosyl hydrolase 9B9 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 31 | 486 | 0 |
| NYGEALTKSLLYFEAQRSGKLPPNQRVNWRGDSALRDGSDAHVDLTGGYYDAGDNMKFGFSMAFTTTMLAWSSVEMESELKTYKEHDNVLAAIKWATDYL INAHPEPNVLYGQVGDGNSDHACWMRPEDMTTPRPSYRIDAQHPGADLAGETAAAMAAASLAFAQYDAAYSAKLIGHAKDLFEFAKAYPGLYQSSITNAG GFYPSSGYQDELFWAAAWLHRATDDQTYLDYLMEEYGTGGQRTIFAWDDKFVGAQVLMAKLALERGGNTGDKLQDFKNMAEYFICNCVQMGSNNVKVTPG GLLWFLPWNNFQYTTTASFVLAAYSKYLKAGNTPINCPSGTFQAADLLYHARTQVDYILGSNPKSMSYMVGFGTNYPKSPPHRGASIVSIKQNSTAVTCN DGMNNWYNNPAPNPNVLTGALVGGPDANDAYGDARTNFQQSEPVTVTVAPFVGVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 490 Download |
| MSQLRSGSSQ CLWTSTLFIA LLSMPMTHGA NYGEALTKSL LYFEAQRSGK LPPNQRVNWR 60 GDSALRDGSD AHVDLTGGYY DAGDNMKFGF SMAFTTTMLA WSSVEMESEL KTYKEHDNVL 120 AAIKWATDYL INAHPEPNVL YGQVGDGNSD HACWMRPEDM TTPRPSYRID AQHPGADLAG 180 ETAAAMAAAS LAFAQYDAAY SAKLIGHAKD LFEFAKAYPG LYQSSITNAG GFYPSSGYQD 240 ELFWAAAWLH RATDDQTYLD YLMEEYGTGG QRTIFAWDDK FVGAQVLMAK LALERGGNTG 300 DKLQDFKNMA EYFICNCVQM GSNNVKVTPG GLLWFLPWNN FQYTTTASFV LAAYSKYLKA 360 GNTPINCPSG TFQAADLLYH ARTQVDYILG SNPKSMSYMV GFGTNYPKSP PHRGASIVSI 420 KQNSTAVTCN DGMNNWYNNP APNPNVLTGA LVGGPDANDA YGDARTNFQQ SEPVTVTVAP 480 FVGVLAAVA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02613 | PLN02613 | 1.0e-161 | 16 | 487 | 476 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 4 | 489 | 489 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 31 | 486 | 462 | + Glycosyl hydrolase family 9. | ||
| PLN02171 | PLN02171 | 0 | 29 | 489 | 467 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 31 | 486 | 462 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_181982.1 | 0 | 1 | 488 | 1 | 490 | AtGH9B9 (Arabidopsis thaliana glycosyl hydrolase 9B9); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_181983.1 | 0 | 1 | 488 | 1 | 489 | AtGH9B10 (Arabidopsis thaliana glycosyl hydrolase 9B10); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_181984.1 | 0 | 1 | 489 | 1 | 491 | AtGH9B11 (Arabidopsis thaliana glycosyl hydrolase 9B11); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_181985.1 | 0 | 8 | 489 | 5 | 492 | AtGH9B12 (Arabidopsis thaliana glycosyl hydrolase 9B12); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002269618.1 | 0 | 31 | 489 | 24 | 481 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 31 | 488 | 4 | 428 | A Chain A, Crystal Structure Of The Tartronic Semialdehyde Reductase From Salmonella Typhimurium Lt2 |
| PDB | 1ksc_A | 0 | 31 | 488 | 4 | 428 | A Chain A, Crystal Structure Of The Tartronic Semialdehyde Reductase From Salmonella Typhimurium Lt2 |
| PDB | 1ks8_A | 0 | 31 | 488 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 31 | 489 | 5 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 31 | 489 | 5 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
