| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra004846 |
| Family | GH9 |
| Protein Properties | Length: 471 Molecular Weight: 51214.7 Isoelectric Point: 8.5954 |
| Chromosome | Chromosome/Scaffold: 05 Start: 2116326 End: 2118247 |
| Description | glycosyl hydrolase 9B11 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 13 | 467 | 0 |
| YGEALTKSLFYFEAQRSGKLPSNQRVNWRGDSALRDGSDAHVDLTGGYYDAGDNMKFGFPLAFTTTMLAWSSVEMASQLKAHKEHKNVLAALKWATDYLI KAHPEPNVLYGQVGDGNSDHACWMRPEDMTTPRPSYRIDAQHPGADLAGETAAAMAAASVAFAPYNAAYAKKLISHAKDLFEFAKAHPGVYQSSISNAGG FYASSGYEDELLWAAAWLHRATKKQIYLNYLNEASNTGGSRTVFAWGDKFVGAQVLMAKLSLEGKVNINKKMEEYKSMAEQFICNCAQKGSNNVKITQGG LLWFLPWNNLQYTTAASFVLSAYSKYLKAANASIKCHGGSLQASDLRNLARAQVDYILGSNPKNMSYMVGFGTNYPKRPHHRGASIVSIKKNRTAVECNA GFNDWYHSPAPNPNVLTGALVGGPDENDAFGDERTDFQHSEPVPATVAPFVGVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 471 Download |
| MSSMTLGAVS RHYGEALTKS LFYFEAQRSG KLPSNQRVNW RGDSALRDGS DAHVDLTGGY 60 YDAGDNMKFG FPLAFTTTML AWSSVEMASQ LKAHKEHKNV LAALKWATDY LIKAHPEPNV 120 LYGQVGDGNS DHACWMRPED MTTPRPSYRI DAQHPGADLA GETAAAMAAA SVAFAPYNAA 180 YAKKLISHAK DLFEFAKAHP GVYQSSISNA GGFYASSGYE DELLWAAAWL HRATKKQIYL 240 NYLNEASNTG GSRTVFAWGD KFVGAQVLMA KLSLEGKVNI NKKMEEYKSM AEQFICNCAQ 300 KGSNNVKITQ GGLLWFLPWN NLQYTTAASF VLSAYSKYLK AANASIKCHG GSLQASDLRN 360 LARAQVDYIL GSNPKNMSYM VGFGTNYPKR PHHRGASIVS IKKNRTAVEC NAGFNDWYHS 420 PAPNPNVLTG ALVGGPDEND AFGDERTDFQ HSEPVPATVA PFVGVLAAIA * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02613 | PLN02613 | 9.0e-173 | 7 | 469 | 469 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 3 | 470 | 468 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 13 | 467 | 461 | + Glycosyl hydrolase family 9. | ||
| PLN02171 | PLN02171 | 0 | 7 | 470 | 473 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 13 | 467 | 461 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_181982.1 | 0 | 3 | 469 | 24 | 490 | AtGH9B9 (Arabidopsis thaliana glycosyl hydrolase 9B9); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_181983.1 | 0 | 3 | 469 | 24 | 489 | AtGH9B10 (Arabidopsis thaliana glycosyl hydrolase 9B10); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_181984.1 | 0 | 3 | 470 | 24 | 491 | AtGH9B11 (Arabidopsis thaliana glycosyl hydrolase 9B11); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_181985.1 | 0 | 1 | 470 | 20 | 492 | AtGH9B12 (Arabidopsis thaliana glycosyl hydrolase 9B12); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002269618.1 | 0 | 7 | 470 | 19 | 481 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 13 | 469 | 5 | 428 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 1ksc_A | 0 | 13 | 469 | 5 | 428 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 1ks8_A | 0 | 13 | 469 | 5 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 12 | 470 | 5 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 12 | 470 | 5 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO783495 | 378 | 15 | 386 | 0 |
| DR369143 | 226 | 3 | 228 | 0 |
| EC958178 | 258 | 7 | 264 | 0 |
| EB428434 | 249 | 10 | 257 | 0 |
| AU237746 | 202 | 1 | 200 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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