| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra004942 |
| Family | GT90 |
| Protein Properties | Length: 639 Molecular Weight: 74764.4 Isoelectric Point: 8.7272 |
| Chromosome | Chromosome/Scaffold: 05 Start: 2582125 End: 2584923 |
| Description | downstream target of AGL15 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT90 | 191 | 439 | 0 |
| RLPDLELLFDADDRPTVRSIDYRGQQHPGPPPVFRYCSNDASLDIVFPDWSFWGWAELNIKPWAKSLVAIEEGNKMTQWEDRVPYAYWRGNPNVARTRKD LLRCNVSDQEDWNTRLYINDWATEFKEGFKNSNLENQCTHRYKIYIEGWAWSVSEKYIMACDSMTLNVRPTYYDFLIRGMVPLQHYWPIRDLGKCRSLKH AVHWGNTHVDQARKIGEEGSRYIREEVSMEYVYDYMFHLMNEYAKLLKF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 639 Download |
| MAQRKSTKGN NRDTQTNTHS NHASIKTSSH QGKRIAKATL LLVLSIFVSA GLLSFLCCFD 60 YTTLTGPRQV TTTITKPPII TLHRFPRQCG VVQNQTQPVS EDGTNKNKPR SNHSRPPTCP 120 SYFRWIYEDL RPWRETGVTR EILEKARSKA HFRVIILDGR VYVKKYRRPI ETRDTFTLWG 180 IVQLLQWYPG RLPDLELLFD ADDRPTVRSI DYRGQQHPGP PPVFRYCSND ASLDIVFPDW 240 SFWGWAELNI KPWAKSLVAI EEGNKMTQWE DRVPYAYWRG NPNVARTRKD LLRCNVSDQE 300 DWNTRLYIND WATEFKEGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLNVRP 360 TYYDFLIRGM VPLQHYWPIR DLGKCRSLKH AVHWGNTHVD QARKIGEEGS RYIREEVSME 420 YVYDYMFHLM NEYAKLLKFK PEIPLGAKEI TTDSMGCPAK GRWRDFMAES MVMSPSEVSP 480 CEMPLPYSPM ELREVLERKA NLTRQVEVWE DQYYQAKTIG RNGSGYVLKY LQMKYVYDYM 540 FHILQSYGKL MKMNVEVPEG AKEVCPETMA CPVKGGRMRQ YMDDSLILSP SNKGSCETPP 600 PFEDDELKKF LEKKKSVEKE VEKWTNEYWE EQNKSLQH* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00672 | CAP10 | 5.0e-8 | 453 | 552 | 100 | + Putative lipopolysaccharide-modifying enzyme. | ||
| pfam05686 | Glyco_transf_90 | 7.0e-31 | 516 | 601 | 86 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
| pfam05686 | Glyco_transf_90 | 1.0e-48 | 395 | 510 | 116 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
| pfam05686 | Glyco_transf_90 | 2.0e-93 | 114 | 289 | 176 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
| smart00672 | CAP10 | 7.0e-125 | 191 | 440 | 256 | + Putative lipopolysaccharide-modifying enzyme. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC28541.1 | 0 | 22 | 515 | 15 | 509 | unknown protein [Arabidopsis thaliana] |
| GenBank | AAC28541.1 | 1e-23 | 515 | 631 | 395 | 510 | unknown protein [Arabidopsis thaliana] |
| DDBJ | BAF00020.1 | 0 | 107 | 515 | 2 | 410 | hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_182107.3 | 0 | 1 | 515 | 1 | 515 | DTA2 (DOWNSTREAM TARGET OF AGL15 2) [Arabidopsis thaliana] |
| RefSeq | NP_182107.3 | 1e-23 | 515 | 631 | 401 | 516 | DTA2 (DOWNSTREAM TARGET OF AGL15 2) [Arabidopsis thaliana] |
