| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra004966 |
| Family | AA1 |
| Protein Properties | Length: 531 Molecular Weight: 58783.2 Isoelectric Point: 8.4524 |
| Chromosome | Chromosome/Scaffold: 05 Start: 2680564 End: 2682949 |
| Description | laccase 5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 37 | 513 | 0 |
| VQLHGVRQMRTGWADGPEFVTQCPIRPGSSYTYRFTIQGQEGTLWWHAHSSWLRATVYGSLLVLPPAGSSYPFPTPHRNVPLLLGEWWDANPVDVLRESI RTGAAPNISDAYTIDGQPGDLYKCSSQDTTIVPINVGETILLRVINSALNQPLFFTVANHKFTVVGADASYLKPFTTNVIVLGPGQTTDVLITGDQPPNR YYMAARAYQSAQNVPFGNTTTTAILQYKSAPCCIGGAKKGTSIKPIMPLLPAYNDTNTVTRFSQSFKSLRKAEVPTELDENLFITIGLGLNNCPKNFRSR RCQGLNGTRFTASMNNVSFALPSNYSLLQAHHHNIPGVFTTDFPAKPPVKFDYTGSNISRSLYQPDRGTKLYKLKYGSRVQIVLQDTGIVTPENHPIHLH GYDFYIVAEGFGNFNPKKDIRKFNLEDPPLRNTVGVPVNGWAVIRFVADNPGVWIMHCHLDAHISWGLAMAFLVENG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 531 Download |
| MKIIKSFLCF ISFAVLFNPM AEANKAHHHE FIVGFEVQLH GVRQMRTGWA DGPEFVTQCP 60 IRPGSSYTYR FTIQGQEGTL WWHAHSSWLR ATVYGSLLVL PPAGSSYPFP TPHRNVPLLL 120 GEWWDANPVD VLRESIRTGA APNISDAYTI DGQPGDLYKC SSQDTTIVPI NVGETILLRV 180 INSALNQPLF FTVANHKFTV VGADASYLKP FTTNVIVLGP GQTTDVLITG DQPPNRYYMA 240 ARAYQSAQNV PFGNTTTTAI LQYKSAPCCI GGAKKGTSIK PIMPLLPAYN DTNTVTRFSQ 300 SFKSLRKAEV PTELDENLFI TIGLGLNNCP KNFRSRRCQG LNGTRFTASM NNVSFALPSN 360 YSLLQAHHHN IPGVFTTDFP AKPPVKFDYT GSNISRSLYQ PDRGTKLYKL KYGSRVQIVL 420 QDTGIVTPEN HPIHLHGYDF YIVAEGFGNF NPKKDIRKFN LEDPPLRNTV GVPVNGWAVI 480 RFVADNPGVW IMHCHLDAHI SWGLAMAFLV ENGKGLLETI EEPPADLPVC * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07731 | Cu-oxidase_2 | 3.0e-44 | 378 | 513 | 140 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 4.0e-58 | 34 | 508 | 505 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-65 | 37 | 508 | 511 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 2.0e-73 | 34 | 508 | 518 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 40 | 530 | 495 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK92474.1 | 0 | 37 | 530 | 63 | 550 | unknown [Populus trichocarpa] |
| RefSeq | NP_181568.1 | 0 | 1 | 530 | 1 | 580 | LAC5 (laccase 5); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002312186.1 | 0 | 37 | 530 | 87 | 574 | laccase 90a [Populus trichocarpa] |
| RefSeq | XP_002315131.1 | 0 | 37 | 530 | 88 | 575 | laccase 90c [Populus trichocarpa] |
| RefSeq | XP_002520796.1 | 0 | 37 | 530 | 89 | 577 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 34 | 508 | 56 | 521 | A Chain A, Structure Of An Esterase From The Oil-Degrading Bacterium Oleispira Antarctica |
| PDB | 1asq_A | 0 | 34 | 508 | 56 | 521 | A Chain A, Structure Of An Esterase From The Oil-Degrading Bacterium Oleispira Antarctica |
| PDB | 1asp_B | 0 | 34 | 508 | 56 | 521 | A Chain A, Structure Of An Esterase From The Oil-Degrading Bacterium Oleispira Antarctica |
| PDB | 1asp_A | 0 | 34 | 508 | 56 | 521 | A Chain A, Structure Of An Esterase From The Oil-Degrading Bacterium Oleispira Antarctica |
| PDB | 1aso_B | 0 | 34 | 508 | 56 | 521 | A Chain A, Structure Of An Esterase From The Oil-Degrading Bacterium Oleispira Antarctica |
