| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra005325 |
| Family | GT77 |
| Protein Properties | Length: 633 Molecular Weight: 71793.5 Isoelectric Point: 6.5693 |
| Chromosome | Chromosome/Scaffold: 05 Start: 4842309 End: 4845577 |
| Description | xyloglucanase 113 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT77 | 158 | 382 | 0 |
| ISNLLVGAMDTKLLEALYWKGVPVFDMGSHMSTVDVGWGSPTFHKMGREKVILIDSVLPFGYELLMCDTDMVWLKNPLPYLARYPEADVLTSSDQVVPTV VDDSLDIWQQVGAAYNIGIFHWRPTEPAKKLAKEWKEMLLADDKVWDQNGFNEIVRKQLGPSVDGDSGLFYAYDGNLKVGILPASIFCSGHTYFVQAMYQ QLRLEPYALHTTFQYAGTEGKRHRL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 633 Download |
| MVEGWRNGFR EATNSKPLFV TIYATVIIGV LVSSFYVFSA IYSPTNGSTS WLSSPPLSTA 60 GRIRQHPQEN VTFQSPVVPP PPRALPLPSP EEAEGKSLGK IWVSPPRDKK MPPLESFKLT 120 KELFGERVKD NVIIVTFGNY AFMDFILTWV KHLTDLDISN LLVGAMDTKL LEALYWKGVP 180 VFDMGSHMST VDVGWGSPTF HKMGREKVIL IDSVLPFGYE LLMCDTDMVW LKNPLPYLAR 240 YPEADVLTSS DQVVPTVVDD SLDIWQQVGA AYNIGIFHWR PTEPAKKLAK EWKEMLLADD 300 KVWDQNGFNE IVRKQLGPSV DGDSGLFYAY DGNLKVGILP ASIFCSGHTY FVQAMYQQLR 360 LEPYALHTTF QYAGTEGKRH RLREGMVFFD PPEYYDAPGG FISFKPSIPK SLLLDGKHTI 420 ESHFTLVNHQ MKQIRSALAI ASLLNRTLVM PPIWCRLDRL WFGHPGTLVG SMTRQPFICP 480 LDHVFEVNIM LKELPEDEFG PGIGIREYSF LDNPALPKQV KESWLDVQLC QEGKEGCEAS 540 NITSPSGFLK FPKRSNEDTF KAIFSSFNDV KVIKFSSGRE ERFRRRVKRY VGIWCCEENK 600 TPGHIYYDMY WDEKPGWKPV PPQTPEEDHP PV* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03407 | Nucleotid_trans | 3.0e-51 | 158 | 382 | 231 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005783 | endoplasmic reticulum |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD15452.2 | 0 | 111 | 632 | 1 | 528 | unknown protein [Arabidopsis thaliana] |
| DDBJ | BAH19600.1 | 0 | 1 | 632 | 1 | 644 | AT2G35610 [Arabidopsis thaliana] |
| RefSeq | NP_850250.1 | 0 | 1 | 632 | 1 | 644 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002328759.1 | 0 | 88 | 631 | 83 | 637 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519934.1 | 0 | 5 | 631 | 4 | 638 | reticulon3-A3, putative [Ricinus communis] |
