| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra005698 |
| Family | AA1 |
| Protein Properties | Length: 654 Molecular Weight: 72453.3 Isoelectric Point: 6.8242 |
| Chromosome | Chromosome/Scaffold: 03 Start: 171653 End: 174873 |
| Description | laccase 8 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 25 | 285 | 0 |
| AAIVEHVFQVKNVVVKPLCKEQMIPTVNGSLPGPTINVREGDTLVVHVINNSTYNITIHWHGVFQLKSSWMDGANMISQCPIQPRNNFTYRFDITGQEGT LLWHAHVVNLRATLHGALIIRPRSGRPYPFPKPYKEVPLVFEQWWDTDIELLNSRPAPISDAYLINGLAGDSYPCSKNRMFKLKVVQGKTYLLRIINAAL NTHLFFKIADHNVTVVSVDAAYTTPYVSDVMILTPGQTVDALLTADQPIGMYYMSISPYIS | |||
| AA1 | 306 | 628 | 0 |
| VVSVDAVYTTPYVSDVMILTPGQTVDALLTADQPNGMYYMEISPYTSANSLVPVPPSTPIRGLIIYEDAKSTASPSNSLMPSGMNAISTAHRFSSNITSL VGGPYWTPVPDHVDEKMFVTMGLGLKPCPPGTKCIGPFGQRYAGSLNNRTFVIPGTISLQEAYFYNISGVYTDDFPDQPPMKFDYANFGVRTNSEYKMMF PERKTSVKTLKYNSTVEIVVQNTGIITPESHPMHLHGFNFYVLGYGFGNYDPIRDADKLNLVNPQMHNTVGVPPGGWVVLRFKANNPGAWMFHCHMDAHL PYGIIMVFIVQNGPTPETSMQPP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 654 Download |
| MPLPIQAFFV PLLFLFFFFS SIATAAIVEH VFQVKNVVVK PLCKEQMIPT VNGSLPGPTI 60 NVREGDTLVV HVINNSTYNI TIHWHGVFQL KSSWMDGANM ISQCPIQPRN NFTYRFDITG 120 QEGTLLWHAH VVNLRATLHG ALIIRPRSGR PYPFPKPYKE VPLVFEQWWD TDIELLNSRP 180 APISDAYLIN GLAGDSYPCS KNRMFKLKVV QGKTYLLRII NAALNTHLFF KIADHNVTVV 240 SVDAAYTTPY VSDVMILTPG QTVDALLTAD QPIGMYYMSI SPYISANSLA PVPPGHDIRS 300 LIVYEVVSVD AVYTTPYVSD VMILTPGQTV DALLTADQPN GMYYMEISPY TSANSLVPVP 360 PSTPIRGLII YEDAKSTASP SNSLMPSGMN AISTAHRFSS NITSLVGGPY WTPVPDHVDE 420 KMFVTMGLGL KPCPPGTKCI GPFGQRYAGS LNNRTFVIPG TISLQEAYFY NISGVYTDDF 480 PDQPPMKFDY ANFGVRTNSE YKMMFPERKT SVKTLKYNST VEIVVQNTGI ITPESHPMHL 540 HGFNFYVLGY GFGNYDPIRD ADKLNLVNPQ MHNTVGVPPG GWVVLRFKAN NPGAWMFHCH 600 MDAHLPYGII MVFIVQNGPT PETSMQPPPS NLPQCTRDPT IYESLATSVD LSS* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 7.0e-47 | 33 | 149 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 1.0e-56 | 23 | 614 | 607 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 1.0e-70 | 21 | 613 | 610 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 1.0e-72 | 27 | 613 | 609 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 25 | 635 | 617 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_195724.1 | 0 | 6 | 305 | 11 | 304 | LAC8 (laccase 8); laccase [Arabidopsis thaliana] |
| RefSeq | NP_195724.1 | 0 | 306 | 652 | 239 | 583 | LAC8 (laccase 8); laccase [Arabidopsis thaliana] |
| RefSeq | NP_195725.1 | 0 | 6 | 318 | 11 | 318 | laccase family protein / diphenol oxidase family protein [Arabidopsis thaliana] |
| RefSeq | NP_195725.1 | 0 | 306 | 652 | 239 | 585 | laccase family protein / diphenol oxidase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002442097.1 | 0 | 1 | 635 | 1 | 576 | hypothetical protein SORBIDRAFT_08g011530 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3sqr_A | 3e-32 | 24 | 278 | 64 | 326 | A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution |
| PDB | 3sqr_A | 0.0000000000005 | 502 | 614 | 427 | 541 | A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution |
| PDB | 3v9e_A | 3e-32 | 24 | 278 | 64 | 326 | A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada |
| PDB | 3v9e_A | 0.0000000000007 | 502 | 614 | 427 | 541 | A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada |
| PDB | 1asq_B | 4e-31 | 25 | 281 | 1 | 281 | A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada |
