| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra005699 |
| Family | AA1 |
| Protein Properties | Length: 541 Molecular Weight: 60132.7 Isoelectric Point: 6.4206 |
| Chromosome | Chromosome/Scaffold: 03 Start: 178800 End: 181242 |
| Description | Laccase/Diphenol oxidase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 2 | 515 | 0 |
| IPTVNGSLPGPTINVREGDTLVVHVINNSTYNITIHWHGVFQLKSPWMDGANMITQCPIQPRNNFTYRFDITGQEGTLLWHAHVVNLRATLHGALIIRPR SGRPYPFPKPYKEVPLIFEQWWDVNIELLNLQPAPICDAYLINGLAGDSYPCSKNRMFKLKVVQGKTYLLRIINAALNTHLFFKIADHNVTVVSVDAAYT TPYVSDVMILTPGQTVDALLTADQPIGMYYMSISPYISANSLAPVPPGHDIRSLIVYEGAKSTSSPSMSLLPSGTNAIPTAHRFSSNITSLVGGPYWTPV PYHVDENMFVTMGLGLDPCPPETTCNGPLGQHIAGSFNNRTFVMPETISLQEAYFYNISGVYTDDFPDQPPMKFDYANFSVRTESDYEMMFPERKTSIKT LKFNSTVEIIVQNTGIISPESHPMHLHGFNFYVLGYGFGNYDPIRDARKLNLVNPQMHNTVGVPPGGWVVLRFIANNPGAWMFHCHMDAHLPYGIIMVFI VENGPTPETSLQPP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 541 Download |
| MIPTVNGSLP GPTINVREGD TLVVHVINNS TYNITIHWHG VFQLKSPWMD GANMITQCPI 60 QPRNNFTYRF DITGQEGTLL WHAHVVNLRA TLHGALIIRP RSGRPYPFPK PYKEVPLIFE 120 QWWDVNIELL NLQPAPICDA YLINGLAGDS YPCSKNRMFK LKVVQGKTYL LRIINAALNT 180 HLFFKIADHN VTVVSVDAAY TTPYVSDVMI LTPGQTVDAL LTADQPIGMY YMSISPYISA 240 NSLAPVPPGH DIRSLIVYEG AKSTSSPSMS LLPSGTNAIP TAHRFSSNIT SLVGGPYWTP 300 VPYHVDENMF VTMGLGLDPC PPETTCNGPL GQHIAGSFNN RTFVMPETIS LQEAYFYNIS 360 GVYTDDFPDQ PPMKFDYANF SVRTESDYEM MFPERKTSIK TLKFNSTVEI IVQNTGIISP 420 ESHPMHLHGF NFYVLGYGFG NYDPIRDARK LNLVNPQMHN TVGVPPGGWV VLRFIANNPG 480 AWMFHCHMDA HLPYGIIMVF IVENGPTPET SLQPPPSNLP QCTHDPTIYE SPTTNVDLSS 540 * 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 5.0e-44 | 4 | 103 | 102 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 6.0e-61 | 4 | 501 | 538 | + L-ascorbate oxidase | ||
| TIGR03388 | ascorbase | 4.0e-79 | 4 | 500 | 530 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| PLN02604 | PLN02604 | 8.0e-83 | 1 | 500 | 541 | + oxidoreductase | ||
| TIGR03389 | laccase | 0 | 2 | 522 | 527 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_195724.1 | 0 | 1 | 539 | 47 | 583 | LAC8 (laccase 8); laccase [Arabidopsis thaliana] |
| RefSeq | NP_195725.1 | 0 | 1 | 539 | 47 | 585 | laccase family protein / diphenol oxidase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002308196.1 | 0 | 1 | 522 | 44 | 562 | laccase 110a [Populus trichocarpa] |
| RefSeq | XP_002333273.1 | 0 | 1 | 522 | 44 | 568 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527888.1 | 0 | 1 | 522 | 17 | 540 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 5 | 500 | 27 | 521 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 1asq_A | 0 | 5 | 500 | 27 | 521 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 1asp_B | 0 | 5 | 500 | 27 | 521 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 1asp_A | 0 | 5 | 500 | 27 | 521 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 1aso_B | 0 | 5 | 500 | 27 | 521 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO797675 | 510 | 26 | 522 | 0 |
| DY271840 | 333 | 137 | 468 | 0 |
| DY270228 | 318 | 75 | 385 | 0 |
| CK272589 | 252 | 1 | 244 | 0 |
| DY941206 | 309 | 170 | 478 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
