CAZyme Information

Basic Information
SpeciesBrassica rapa
Cazyme IDBra005854
FamilyGH85
Protein PropertiesLength: 681 Molecular Weight: 76467.8 Isoelectric Point: 6.5508
ChromosomeChromosome/Scaffold: 03 Start: 937128 End: 939987
DescriptionGlycosyl hydrolase family 85
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH85743550
  MKGGYVDDKWVQGCGNNKGFAIWNWYLMDVFVYFAHSLVTLPPPCWTNTAHRHGVKVLGTFITEWDEGKATCKELLATKESAQMYAERLAELAAALGFDG
  WLINIENVIDKVQIPNLKTFVSHLTKVMHSSVPGSLVIWYDSVTVEGRLAWQDQLNEMNKPFFDICDGIFMNYTWKENYPKASAKIAGERKHDVYMGIDV
  FGRGTFGGGQWKANVALDLLKSSDVSAALFAPGWVYETNQPPDYHTAQNKWWSLVEKSWGIVQTYPQSLPFYSDFNQGLGSH
Full Sequence
Protein Sequence     Length: 681     Download
MSISKDETML APLPPFDPTK PSTPISFPIK TLQDLASRSY FDSFHFPFNR SSVSLRQNIG    60
SLPDRSRLLV CHDMKGGYVD DKWVQGCGNN KGFAIWNWYL MDVFVYFAHS LVTLPPPCWT    120
NTAHRHGVKV LGTFITEWDE GKATCKELLA TKESAQMYAE RLAELAAALG FDGWLINIEN    180
VIDKVQIPNL KTFVSHLTKV MHSSVPGSLV IWYDSVTVEG RLAWQDQLNE MNKPFFDICD    240
GIFMNYTWKE NYPKASAKIA GERKHDVYMG IDVFGRGTFG GGQWKANVAL DLLKSSDVSA    300
ALFAPGWVYE TNQPPDYHTA QNKWWSLVEK SWGIVQTYPQ SLPFYSDFNQ GLGSHVSLQG    360
QKLSDAPWYN ISCQSLQPLL EFNEGNKSEA MQVMVDGREA SYNGGGNISF KGTLKRNAHY    420
TTRLFKPNLK LSGSHISVSY SVKSDERSML GLLLRFSTPS QETKSLIMAP NEYMHRFGDM    480
FLPCLRRTTS DWTVHETNLL MDGHTLTEIS ALCYGPDDLA EETNTQGYSA LLGHISIKSQ    540
QKTKPFPPAS AWVVEAHNIE IVPGDSGSRT LNCKLQWRLK HPEEDSVFTR YNVYAEKLNS    600
SDDKSRKVME EPRSEKVFLG TAHVDAYYIS DMVVGPDVKK VKFVIQTCGE DGSWQELDAS    660
PNILVEAERL SSKLCCCGLI * 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00598GH18_chitinase-like0.0005120238134+
COG4724COG47244.0e-3448454450+
pfam03644Glyco_hydro_855.0e-11874355301+
cd06547GH85_ENGase3.0e-13669382334+
Gene Ontology
GO TermDescription
GO:0005737cytoplasm
GO:0033925mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
DDBJBAB09989.101967016621unnamed protein product [Arabidopsis thaliana]
RefSeqNP_187715.101367115697glycosyl hydrolase family 85 protein [Arabidopsis thaliana]
RefSeqNP_196165.301968016680hydrolase, acting on glycosyl bonds / mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [Arabidopsis thaliana]
RefSeqXP_002273683.1016681688PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002520784.101466815685endo beta n-acetylglucosaminidase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3fha_D3e-314765028604A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fha_C3e-314765028604A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fha_B3e-314765028604A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fha_A3e-314765028604A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fhq_F3e-314765028604A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EV1182252371023380
CN7271352394446810
EV1181392134696810
EV1603082471163620
GR4469702084746810
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00225.1
Arabidopsis lyrata497439.76.201497439.76.201872478497439.204.302487338
497439.204.302
Arabidopsis thalianaAT5G05460.1AT3G11040.1
Brachypodium distachyonBradi1g14127.1
Brassica rapaBra034160
Carica papayaevm.model.supercontig_19.130
Capsella rubellaCarubv10000369mCarubv10013078m
Chlamydomonas reinhardtiiCre13.g582250.t1.2
Citrus clementinaCiclev10031026m.70.259Ciclev10031026m.70.259Ciclev10030777m
Cucumis sativusCucsa.144380.1Cucsa.144370.1
Eucalyptus grandisEucgr.J00174.1
Fragaria vescamrna21040.1-v1.0-hybrid
Glycine maxGlyma14g06120.2Glyma18g40011.1Glyma02g43025.1Glyma11g35630.1Glyma14g06130.1
Glyma14g06120.1Glyma18g02770.1Glyma02g43020.2
Gossypium raimondiiGorai.012G079500.1Gorai.011G290600.1
Linum usitatissimumLus10017430Lus10007526
Manihot esculentacassava4.1_029708mcassava4.1_031267m
Medicago truncatulaMedtr3g071610.1
Mimulus guttatusmgv1a002327mmgv1a001722m
Oryza sativaLOC_Os05g27960.1
Physcomitrella patensPp1s13_33V6.2Pp1s13_33V6.1
Phaseolus vulgarisPhvul.001G245900.1
Picea abiesMA_10436931g0010MA_10435721g0010
Populus trichocarpaPotri.008G073000.1Potri.010G184300.1Potri.010G184300.2Potri.010G184200.1Potri.010G184200.2
Prunus persicappa015834m
Ricinus communis29729.m00228229729.m002279
Setaria italicaSi021368m
Selaginella moellendorffii61572
Sorghum bicolorSb09g016230.1
Thellungiella halophilaThhalv10012879mThhalv10020200m
Vitis viniferaGSVIVT01032751001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny