| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra005988 |
| Family | GH27 |
| Protein Properties | Length: 549 Molecular Weight: 61206.8 Isoelectric Point: 6.4467 |
| Chromosome | Chromosome/Scaffold: 03 Start: 1506873 End: 1512465 |
| Description | alpha-galactosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH27 | 380 | 463 | 4.2e-24 |
| SMTMIADQNDRWASYARPGSWNDPDMLEVGNGGMTREEYRSHFSIWALAKAPLLIGCDLRSMDKVTYELLSNKEVIGVNQEEQC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 549 Download |
| MARGEKSEMV KMSVLMIVMM SSMLMTTSRS VQRAPDVDSE DSEIVRRHLL ANGLGVTPPM 60 GSVQLLCLSL ALCLAFMFLM MSERNDCWAE LARDQKGNLV PKKSTFPSGI KALADYVHSK 120 GLKLGIYSDA GYLTCSKTMP GSLGHEEQDA KTFAEWGIDY LKYDNCNTDG SRPTVRYPVM 180 TRALMKSGRP IFHSLCECML ANADMNEFYA EHARPGGWND PDMLEVGNGG MTKDEYIVHF 240 SIWAISKAPL LLGCDIRNMT KETMEIVANK EVIAINQVIT IIEGNKQINF DQAMVLLGFF 300 LLIITFTLSL SLTLTQVVDG FQSRMLMNNG LALTPQMGTL TCSQTMPVSL GHEEQDAKTF 360 ASWWNKNMKM IVSSFYLVIS MTMIADQNDR WASYARPGSW NDPDMLEVGN GGMTREEYRS 420 HFSIWALAKA PLLIGCDLRS MDKVTYELLS NKEVIGVNQE EQCEHIDMHM QVWAGPLSMK 480 RVAVILWNRG SSTANITARW EDIGLDSSAI VNARDLWAHS THSGVRKQLS ALVEPHACKM 540 YTLTRSKA* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02692 | PLN02692 | 1.0e-62 | 331 | 543 | 274 | + alpha-galactosidase | ||
| PLN02808 | PLN02808 | 7.0e-98 | 338 | 545 | 266 | + alpha-galactosidase | ||
| PLN02808 | PLN02808 | 2.0e-115 | 43 | 286 | 287 | + alpha-galactosidase | ||
| PLN02692 | PLN02692 | 3.0e-140 | 40 | 277 | 281 | + alpha-galactosidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM13199.1 | 0 | 6 | 277 | 4 | 316 | alpha-galactosidase-like protein [Arabidopsis thaliana] |
| GenBank | AAM13199.1 | 0 | 379 | 543 | 236 | 406 | alpha-galactosidase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_196455.1 | 0 | 6 | 277 | 4 | 316 | AtAGAL1 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 1); alpha-galactosidase/ catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_196455.1 | 0 | 379 | 543 | 236 | 406 | AtAGAL1 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 1); alpha-galactosidase/ catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002513158.1 | 0 | 42 | 277 | 40 | 318 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uas_A | 0 | 50 | 286 | 1 | 280 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 1uas_A | 0 | 331 | 544 | 90 | 360 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 3a5v_A | 0 | 52 | 286 | 3 | 304 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 3a5v_A | 2e-28 | 395 | 540 | 231 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| ajugose biosynthesis II (galactinol-independent) | RXN-8285 | EC-2.4.1 | ajugose synthase |
| ajugose biosynthesis II (galactinol-independent) | RXN-8286 | EC-2.4.1 | verbascose synthase |
| ajugose biosynthesis II (galactinol-independent) | RXN-8287 | EC-2.4.1 | stachyose synthase |
