| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra006171 |
| Family | GH127 |
| Protein Properties | Length: 858 Molecular Weight: 96250.2 Isoelectric Point: 6.6953 |
| Chromosome | Chromosome/Scaffold: 03 Start: 2336886 End: 2340720 |
| Description | Putative glycosyl hydrolase of unknown function (DUF1680) |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH127 | 354 | 627 | 6.2e-26 |
| PLHKEISMFFMDIVNASHSYATGGTSVNEFWQDPKRMATTLQTENEESCTTYNMLKVSRNLFRWTKEVSYADYYERALTNGVLGIQRGTEPGLMIYMLPL GKGVSKAVTYHGWGTPYDSFWCCYGTGVESFSKLGDSIYFQEDGESPALYVTQYISSSLDWKTTGLTLSQRVIPVVSWDPYMRVTFSFSSSKGGMGKEST LNLRIPVWTNSESAKVSFNGQPLKVPASGNFLSIKQNWKSGDQVTMELPLSIRTEAIKDDRPEYSSLQAILYGP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 858 Download |
| MKSCLIITFA LLLLYIISVL CLAKECTNTP SQLSSHTFRN ALLQSKNESL KTEMFSHYHL 60 TPTDDTAWSS LLPRKMLREE EDEYGWTMMY RKIKNSDSFL KEVSLHDVRL DPNSFHWRAQ 120 QTNLEYLLML DVDSLAWSFR KAAGLDAPGS YYGGWERPDS ELRGHFVGHY LSATAYMWAS 180 THNNTLKEKM SALVSALSTC QQKLGTGYLS AFPSSFFDRF EAITPVWAPY YTIHKILTGL 240 VDQYKLAGNT QALKMATWMG DYFYGRVRNV IKTYSVERHW QSLNEETGGM NDVLYQIYSI 300 TGDSKYLLLA HLFDKPCFLG VLAVQADDIS GFHSNTHIPI VVGSQLRYEI TGDPLHKEIS 360 MFFMDIVNAS HSYATGGTSV NEFWQDPKRM ATTLQTENEE SCTTYNMLKV SRNLFRWTKE 420 VSYADYYERA LTNGVLGIQR GTEPGLMIYM LPLGKGVSKA VTYHGWGTPY DSFWCCYGTG 480 VESFSKLGDS IYFQEDGESP ALYVTQYISS SLDWKTTGLT LSQRVIPVVS WDPYMRVTFS 540 FSSSKGGMGK ESTLNLRIPV WTNSESAKVS FNGQPLKVPA SGNFLSIKQN WKSGDQVTME 600 LPLSIRTEAI KDDRPEYSSL QAILYGPYLL AGLTSRDWSI TTQPKDGKWI SSIPETHNTH 660 LVTLSQQSGN ISYVLSNNNQ TITMEVSPEP GTQAAVAATF RLVTADSKGK VSIPEELIGS 720 VVMIEPFDFP GMLVTQATDS SLAVQDSSSI DQEASSFRLV AGVDGNPGSI SLRLESKKGC 780 FVYSDQTLKA GMKLKLKCDS DASDDKFKQA ASFRLRKGMS QYNPMSFMMS GTQRNFVLSP 840 LFNLRDETYN VYFSVRT* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3533 | COG3533 | 5.0e-68 | 105 | 644 | 546 | + Uncharacterized protein conserved in bacteria [Function unknown] | ||
| pfam07944 | DUF1680 | 0 | 107 | 631 | 533 | + Putative glycosyl hydrolase of unknown function (DUF1680). The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB88260.1 | 0 | 24 | 856 | 24 | 859 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_196799.1 | 0 | 24 | 857 | 25 | 861 | catalytic [Arabidopsis thaliana] |
| RefSeq | NP_196800.2 | 0 | 24 | 856 | 29 | 864 | catalytic [Arabidopsis thaliana] |
| RefSeq | XP_002285548.1 | 0 | 1 | 856 | 6 | 863 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002297785.1 | 0 | 10 | 856 | 3 | 857 | predicted protein [Populus trichocarpa] |
