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Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra006578 |
Family | GT4 |
Protein Properties | Length: 807 Molecular Weight: 92449.1 Isoelectric Point: 5.9946 |
Chromosome | Chromosome/Scaffold: 03 Start: 4123607 End: 4127438 |
Description | sucrose synthase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 565 | 732 | 0 |
LKDKKKPILFTMARLDRVKNLSGLVEWYGKNKRLRDLVNLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMNRVRNGELYRYICDTKG AFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKED |
Full Sequence |
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Protein Sequence Length: 807 Download |
MVNGVLTRVH SQRERLNETL VAQRNEVLAL LSRVEAKGKG ILQQNQIIAE FEALPEETQK 60 KIEGGAFFDL LKTTQEAIVL PPWVALAVRP RPGVWEYIRV NLHALVVEEL QPAEFLHFKE 120 ELVDGVKNGD FTLELDFEPF NASVPRPTLP KYIGDGVEFL NRHLSAKLFH EKDSLLPLLK 180 FLQLHSHQGK TLMLNEKIQN LNTLQHILRK AEEYLAKLSP ETPYEDFEAK FEEIGLERGW 240 GNNAERVLDM LRLLLDLLEA PDPCTLETFL GRIPMVFNVV ILSPHGYFAQ DNVLGYPDTG 300 GQVVYILDQV RALETEMLQR IKQQGLNITP RILILTRLLP DAVGTTCGER LERVDGSEYC 360 DILRVPFRTE KGIVRKWISR FEVWPYLETY TEDAAVELAK ELKGKPDLII GNYSDGNLVA 420 SLLAHKLGVT QCTIAHALEK TKYPDSDIYW KKLDDKYHFS CQFTADLFAM NHTDFIITST 480 LQEIAGSKDT VGQYESHTAF TLPGLYRVVH GIDVFDPKFN IVSPGADMSI YFPYTEEKRR 540 LTKFHPEIEE LLYSDVENQE HLCVLKDKKK PILFTMARLD RVKNLSGLVE WYGKNKRLRD 600 LVNLVVVGGD RRKESKDNEE KAEMKKMYDL IEEYKLNGQF RWISSQMNRV RNGELYRYIC 660 DTKGAFVQPA LYEAFGLTVV EAMTCGLPTF ATCKGGPAEI IVHGKSGFHI DPYHGDQAAD 720 TLADFFTKCK EDPSHWDEIS KGGLQRIEEK YTWQIYSQRL LTLTGVYGFW KHVSNLDRLE 780 SRRYLEMFYA LKYRPLAKAV PLAEEE* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 2.0e-61 | 279 | 763 | 494 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 7.0e-125 | 278 | 762 | 488 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 1 | 806 | 809 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 24 | 803 | 784 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 7 | 554 | 550 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACV72640.1 | 0 | 1 | 805 | 1 | 805 | sucrose synthase 1 [Gossypium hirsutum] |
DDBJ | BAA89049.1 | 0 | 1 | 805 | 1 | 805 | sucrose synthase [Citrus unshiu] |
EMBL | CAA50317.1 | 0 | 5 | 806 | 7 | 807 | sucrose synthase [Arabidopsis thaliana] |
RefSeq | NP_197583.1 | 0 | 5 | 806 | 7 | 808 | SUS1 (SUCROSE SYNTHASE 1); UDP-glycosyltransferase/ sucrose synthase [Arabidopsis thaliana] |
RefSeq | NP_566865.2 | 0 | 5 | 806 | 7 | 808 | SUS4; UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 5 | 806 | 7 | 808 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3s29_G | 0 | 5 | 806 | 7 | 808 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3s29_F | 0 | 5 | 806 | 7 | 808 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3s29_E | 0 | 5 | 806 | 7 | 808 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3s29_D | 0 | 5 | 806 | 7 | 808 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794519 | 805 | 1 | 805 | 0 |
BU103683 | 802 | 5 | 805 | 0 |
CX109054 | 594 | 105 | 698 | 0 |
FG227316 | 453 | 276 | 728 | 0 |
GW837855 | 430 | 324 | 753 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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